RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
EGR1-201ENST00000239938 SYT1P21579 422 aa16.77■□□□□ 0.28
EGR1-201ENST00000239938 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
EGR1-201ENST00000239938 CCDC94Q9BW85 323 aaPredicted RBP16.77■□□□□ 0.28
EGR1-201ENST00000239938 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.27
EGR1-201ENST00000239938 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.27
EGR1-201ENST00000239938 MLECQ14165 292 aa16.77■□□□□ 0.27
EGR1-201ENST00000239938 USP44Q9H0E7 712 aa16.77■□□□□ 0.27
EGR1-201ENST00000239938 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.27
EGR1-201ENST00000239938 AK2P54819 239 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
EGR1-201ENST00000239938 ARHGEF10O15013 1369 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 GNAI3P08754 354 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 CPA1P15085 419 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 KDM4AO75164 1064 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 LARGE1O95461 756 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 PRIMPOLQ96LW4 560 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
EGR1-201ENST00000239938 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 LSG1Q9H089 658 aaKnown RBP16.75■□□□□ 0.27
EGR1-201ENST00000239938 ACEP12821 1306 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 RAD50Q92878 1312 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 STX6O43752 255 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 UBE2HP62256 183 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 HMGN5P82970 282 aaKnown RBP16.75■□□□□ 0.27
EGR1-201ENST00000239938 PLCB2Q00722 1185 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 GIMAP6Q6P9H5 292 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 KCNF1Q9H3M0 494 aa16.75■□□□□ 0.27
EGR1-201ENST00000239938 SGSM2O43147 1006 aa16.74■□□□□ 0.27
EGR1-201ENST00000239938 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
EGR1-201ENST00000239938 STK31Q9BXU1 1019 aa16.74■□□□□ 0.27
EGR1-201ENST00000239938 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
EGR1-201ENST00000239938 AOX1Q06278 1338 aa16.74■□□□□ 0.27
EGR1-201ENST00000239938 FIBPO43427 364 aa16.74■□□□□ 0.27
EGR1-201ENST00000239938 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
EGR1-201ENST00000239938 TECPR2O15040 1411 aa16.73■□□□□ 0.27
EGR1-201ENST00000239938 F13A1P00488 732 aa16.73■□□□□ 0.27
EGR1-201ENST00000239938 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
EGR1-201ENST00000239938 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
EGR1-201ENST00000239938 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
EGR1-201ENST00000239938 CBX1P83916 185 aa16.73■□□□□ 0.27
EGR1-201ENST00000239938 EPB41L2O43491 1005 aaKnown RBP16.72■□□□□ 0.27
EGR1-201ENST00000239938 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
EGR1-201ENST00000239938 PYCARDQ9ULZ3 195 aa16.72■□□□□ 0.27
EGR1-201ENST00000239938 ROBO2Q9HCK4 1378 aa16.72■□□□□ 0.27
EGR1-201ENST00000239938 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
EGR1-201ENST00000239938 IGSF3O75054 1194 aa16.72■□□□□ 0.27
EGR1-201ENST00000239938 SIRT1Q96EB6 747 aa16.72■□□□□ 0.27
EGR1-201ENST00000239938 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
EGR1-201ENST00000239938 KDRP35968 1356 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 N4BP2Q86UW6 1770 aaPredicted RBP16.71■□□□□ 0.27
EGR1-201ENST00000239938 DNM1Q05193 864 aaKnown RBP16.71■□□□□ 0.27
EGR1-201ENST00000239938 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 KIAA1524Q8TCG1 905 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 FMN2Q9NZ56 1722 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 USP6P35125 1406 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 EYA1Q99502 592 aa16.71■□□□□ 0.27
EGR1-201ENST00000239938 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
EGR1-201ENST00000239938 LETM1O95202 739 aaPredicted RBP16.7■□□□□ 0.26
EGR1-201ENST00000239938 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 POLA2Q14181 598 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 PHAXQ9H814 394 aaKnown RBP16.7■□□□□ 0.26
EGR1-201ENST00000239938 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 TOPAZ1Q8N9V7 1692 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
EGR1-201ENST00000239938 MTMR6Q9Y217 621 aa16.7■□□□□ 0.26
EGR1-201ENST00000239938 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
EGR1-201ENST00000239938 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
EGR1-201ENST00000239938 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
EGR1-201ENST00000239938 SMC3Q9UQE7 1217 aa16.69■□□□□ 0.26
EGR1-201ENST00000239938 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
EGR1-201ENST00000239938 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
EGR1-201ENST00000239938 GJB2P29033 226 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
EGR1-201ENST00000239938 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
EGR1-201ENST00000239938 PTH1RQ03431 593 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 DMTNQ08495 405 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
EGR1-201ENST00000239938 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
EGR1-201ENST00000239938 CRYBG1Q9Y4K1 1723 aa16.67■□□□□ 0.26
EGR1-201ENST00000239938 PPP4R3BQ5MIZ7 849 aa16.67■□□□□ 0.26
EGR1-201ENST00000239938 SPC24Q8NBT2 197 aa16.67■□□□□ 0.26
EGR1-201ENST00000239938 CACNA1FO60840 1977 aa16.67■□□□□ 0.26
EGR1-201ENST00000239938 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
EGR1-201ENST00000239938 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
EGR1-201ENST00000239938 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
EGR1-201ENST00000239938 RIOK3O14730 519 aaKnown RBP16.65■□□□□ 0.26
EGR1-201ENST00000239938 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms