RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
YIPF4-201ENST00000238831 CCDC144CPQ8IYA2 1237 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 UBXN4Q92575 508 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 IQCA1Q86XH1 822 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 UTP14AQ9BVJ6 771 aaKnown RBP10.04□□□□□ -0.8
YIPF4-201ENST00000238831 CABP1Q9NZU7 370 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 MYD88Q99836 296 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 IKBKGQ9Y6K9 419 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 HMGB2P26583 209 aaKnown RBP10.04□□□□□ -0.8
YIPF4-201ENST00000238831 SSRP1Q08945 709 aaKnown RBP10.04□□□□□ -0.8
YIPF4-201ENST00000238831 ANKLE2Q86XL3 938 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 SLC12A7Q9Y666 1083 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 SLC5A1P13866 664 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 MTIF2P46199 727 aaKnown RBP10.03□□□□□ -0.8
YIPF4-201ENST00000238831 DPH6Q7L8W6 267 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 NGLY1Q96IV0 654 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 MAP3K11Q16584 847 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 BOLA2Q9H3K6 86 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 A0A087WZG4 1122 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 FYCO1Q9BQS8 1478 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 MAP3K12Q12852 859 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 CCDC194A0A1B0GVG4 234 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 CATIPQ7Z7H3 387 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 CCDC83Q8IWF9 413 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 TIGD1Q96MW7 591 aa10.03□□□□□ -0.8
YIPF4-201ENST00000238831 USO1O60763 962 aaKnown RBP10.02□□□□□ -0.8
YIPF4-201ENST00000238831 ZSCAN31Q96LW9 406 aaPredicted RBP10.02□□□□□ -0.8
YIPF4-201ENST00000238831 MYO1BO43795 1136 aa10.02□□□□□ -0.8
YIPF4-201ENST00000238831 CCDC175P0C221 793 aa10.02□□□□□ -0.8
YIPF4-201ENST00000238831 PAFAH1B1P43034 410 aa10.02□□□□□ -0.8
YIPF4-201ENST00000238831 PLS1Q14651 629 aa10.02□□□□□ -0.8
YIPF4-201ENST00000238831 CCDC40Q4G0X9 1142 aa10.02□□□□□ -0.8
YIPF4-201ENST00000238831 PAIP2Q9BPZ3 127 aaKnown RBP10.02□□□□□ -0.8
YIPF4-201ENST00000238831 ACTN2P35609 894 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 CFAP70Q5T0N1 1121 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 FERMT3Q86UX7 667 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 CALML4Q96GE6 196 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 TERF1P54274 439 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 IFIT5Q13325 482 aaKnown RBP10.02□□□□□ -0.81
YIPF4-201ENST00000238831 CCDC196A0A1B0GTZ2 297 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 CFAP57Q96MR6 1250 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 TOP1P11387 765 aaKnown RBP10.02□□□□□ -0.81
YIPF4-201ENST00000238831 C8orf76Q96K31 380 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 WIZO95785 1651 aa10.02□□□□□ -0.81
YIPF4-201ENST00000238831 TTC21AQ8NDW8 1320 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 CCDC174Q6PII3 467 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 CHD1LQ86WJ1 897 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 TRMT112Q9UI30 125 aaKnown RBP10.01□□□□□ -0.81
YIPF4-201ENST00000238831 WWC3Q9ULE0 1092 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 A0A1W2PRG0 241 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 PSMC4P43686 418 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 GBP3Q9H0R5 595 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 GNAT3A8MTJ3 354 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 IFIT3O14879 490 aaKnown RBP10.01□□□□□ -0.81
YIPF4-201ENST00000238831 GPTP24298 496 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 TAF12Q16514 161 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 SREK1Q8WXA9 508 aaKnown RBP10.01□□□□□ -0.81
YIPF4-201ENST00000238831 CABP5Q9NP86 173 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 URI1O94763 535 aaPredicted RBP10.01□□□□□ -0.81
YIPF4-201ENST00000238831 NDC80O14777 642 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
YIPF4-201ENST00000238831 PHAXQ9H814 394 aaKnown RBP10.01□□□□□ -0.81
YIPF4-201ENST00000238831 ZNF213O14771 459 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 PHACTR2O75167 634 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 IDEP14735 1019 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 SFPQP23246 707 aaKnown RBP eCLIP10□□□□□ -0.81
YIPF4-201ENST00000238831 FAM212AQ96EL1 285 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 RFX1P22670 979 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 BIN2Q9UBW5 565 aaPredicted RBP10□□□□□ -0.81
YIPF4-201ENST00000238831 RTEL1-TNFRSF6BF6WH68 1400 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 MAATS1Q7Z4T9 603 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
YIPF4-201ENST00000238831 POLR3GO15318 223 aaPredicted RBP10□□□□□ -0.81
YIPF4-201ENST00000238831 RBM25P49756 843 aaKnown RBP10□□□□□ -0.81
YIPF4-201ENST00000238831 CCT2P78371 535 aaKnown RBP10□□□□□ -0.81
YIPF4-201ENST00000238831 CNNM3Q8NE01 707 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 MXRA7P84157 204 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 STXBP4Q6ZWJ1 553 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 EXOC6BQ9Y2D4 811 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 ZSCAN12O43309 604 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 PTPN14Q15678 1187 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 MCM3P25205 808 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 ODF2LQ9ULJ1 636 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 FANCIQ9NVI1 1328 aa10□□□□□ -0.81
YIPF4-201ENST00000238831 SYCE3A1L190 88 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
YIPF4-201ENST00000238831 ALS2CR12Q96Q35 445 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 SLU7O95391 586 aaKnown RBP9.99□□□□□ -0.81
YIPF4-201ENST00000238831 HLA-DOAP06340 250 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 ISM2Q6H9L7 571 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 GOLGA8BA8MQT2 603 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 USHBP1Q8N6Y0 703 aa9.99□□□□□ -0.81
YIPF4-201ENST00000238831 SLC12A5Q9H2X9 1139 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms