RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 LMTK2Q8IWU2 1503 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 RAD21O60216 631 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 TPM4P67936 248 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 SPHKAPQ2M3C7 1700 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 NACAP1Q9BZK3 213 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 ZBTB40Q9NUA8 1239 aa18.92■□□□□ 0.62
TMEM30A-201ENST00000230461 GRM8O00222 908 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 NUCB1Q02818 461 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 ECHDC1Q9NTX5 307 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 GSE1Q14687 1217 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 DHX16O60231 1041 aaKnown RBP18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 LGR6Q9HBX8 967 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 ANKRD18BA2A2Z9 1011 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 RTN4Q9NQC3 1192 aaKnown RBP18.91■□□□□ 0.62
TMEM30A-201ENST00000230461 IFIT1P09914 478 aaKnown RBP18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 PDCP20941 246 aa18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 JARID2Q92833 1246 aaPredicted RBP18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 IDH1O75874 414 aaKnown RBP18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 BLOC1S2Q6QNY1 142 aa18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 PIP4K2AP48426 406 aaPredicted RBP18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 SAFBQ15424 915 aaKnown RBP eCLIP18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 USP6P35125 1406 aa18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 ATP8B2P98198 1209 aa18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 SMARCC1Q92922 1105 aaPredicted RBP18.9■□□□□ 0.62
TMEM30A-201ENST00000230461 RHPN1Q8TCX5 695 aa18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 HOXB7P09629 217 aa18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 FOSBP53539 338 aa18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 ANKRD1Q15327 319 aa18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 ZNF790Q6PG37 636 aa18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 CTNNA3Q9UI47 895 aa18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 RRP12Q5JTH9 1297 aaKnown RBP18.89■□□□□ 0.61
TMEM30A-201ENST00000230461 BICD2Q8TD16 824 aa18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 LRP2BPQ9P2M1 347 aa18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 INO80Q9ULG1 1556 aaPredicted RBP18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 TRPM1Q7Z4N2 1603 aa18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 SLC3A2P08195 630 aaKnown RBP18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 PHAXQ9H814 394 aaKnown RBP18.88■□□□□ 0.61
TMEM30A-201ENST00000230461 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 JAKMIP1Q96N16 626 aaKnown RBP18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 KRT32Q14532 448 aa18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 G2E3Q7L622 706 aa18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 E9PCH4 1651 aa18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
TMEM30A-201ENST00000230461 ATP6V1AP38606 617 aa18.86■□□□□ 0.61
TMEM30A-201ENST00000230461 RAI14Q9P0K7 980 aa18.86■□□□□ 0.61
TMEM30A-201ENST00000230461 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
TMEM30A-201ENST00000230461 ABCF2Q9UG63 623 aa18.86■□□□□ 0.61
TMEM30A-201ENST00000230461 TTC22Q5TAA0 569 aa18.85■□□□□ 0.61
TMEM30A-201ENST00000230461 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
TMEM30A-201ENST00000230461 TBC1D9Q6ZT07 1266 aa18.85■□□□□ 0.61
TMEM30A-201ENST00000230461 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
TMEM30A-201ENST00000230461 CEP85Q6P2H3 762 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 PLEKHF1Q96S99 279 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 ZBTB7BO15156 539 aaPredicted RBP18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 AK7Q96M32 723 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
TMEM30A-201ENST00000230461 ARHGEF25Q86VW2 580 aa18.83■□□□□ 0.61
TMEM30A-201ENST00000230461 PDRG1Q9NUG6 133 aa18.83■□□□□ 0.61
TMEM30A-201ENST00000230461 CAVIN4Q5BKX8 364 aa18.83■□□□□ 0.61
TMEM30A-201ENST00000230461 TSHZ3Q63HK5 1081 aa18.83■□□□□ 0.61
TMEM30A-201ENST00000230461 EVI5LQ96CN4 794 aa18.83■□□□□ 0.61
TMEM30A-201ENST00000230461 SLC52A2Q9HAB3 445 aa18.83■□□□□ 0.61
TMEM30A-201ENST00000230461 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
TMEM30A-201ENST00000230461 CEP152O94986 1710 aa18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 SLC5A1P13866 664 aa18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 CHAF1AQ13111 956 aaPredicted RBP18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 NAP1L5Q96NT1 182 aaPredicted RBP18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 ALKQ9UM73 1620 aa18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 XBP1P17861 261 aa18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
TMEM30A-201ENST00000230461 TDO2P48775 406 aa18.81■□□□□ 0.6
TMEM30A-201ENST00000230461 PDE1AP54750 535 aa18.81■□□□□ 0.6
TMEM30A-201ENST00000230461 ZSCAN31Q96LW9 406 aaPredicted RBP18.81■□□□□ 0.6
TMEM30A-201ENST00000230461 BECN2A8MW95 431 aa18.81■□□□□ 0.6
TMEM30A-201ENST00000230461 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
TMEM30A-201ENST00000230461 STK3Q13188 491 aa18.81■□□□□ 0.6
TMEM30A-201ENST00000230461 CCDC73Q6ZRK6 1079 aa18.8■□□□□ 0.6
TMEM30A-201ENST00000230461 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
TMEM30A-201ENST00000230461 MTMR7Q9Y216 660 aa18.8■□□□□ 0.6
TMEM30A-201ENST00000230461 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
TMEM30A-201ENST00000230461 CIZ1Q9ULV3 898 aaPredicted RBP18.8■□□□□ 0.6
TMEM30A-201ENST00000230461 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
TMEM30A-201ENST00000230461 CASTP20810 708 aaKnown RBP18.79■□□□□ 0.6
TMEM30A-201ENST00000230461 RFC4P35249 363 aa18.79■□□□□ 0.6
TMEM30A-201ENST00000230461 U3KPZ7 1027 aaPredicted RBP18.79■□□□□ 0.6
TMEM30A-201ENST00000230461 PPRC1Q5VV67 1664 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms