RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 DCCP43146 1447 aa21.37■■□□□ 1.01
CDKN1B-201ENST00000228872 USP48Q86UV5 1035 aa21.37■■□□□ 1.01
CDKN1B-201ENST00000228872 RRS1Q15050 365 aaKnown RBP21.36■■□□□ 1.01
CDKN1B-201ENST00000228872 PDCL2Q8N4E4 241 aa21.36■■□□□ 1.01
CDKN1B-201ENST00000228872 XIRP1Q702N8 1843 aaKnown RBP21.35■■□□□ 1.01
CDKN1B-201ENST00000228872 HMOX1P09601 288 aa21.35■■□□□ 1.01
CDKN1B-201ENST00000228872 FOXD4L6Q3SYB3 417 aaPredicted RBP21.35■■□□□ 1.01
CDKN1B-201ENST00000228872 FOXD4L3Q6VB84 417 aaPredicted RBP21.35■■□□□ 1.01
CDKN1B-201ENST00000228872 C19orf44Q9H6X5 657 aa21.35■■□□□ 1.01
CDKN1B-201ENST00000228872 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
CDKN1B-201ENST00000228872 CCDC183Q5T5S1 534 aa21.34■■□□□ 1.01
CDKN1B-201ENST00000228872 IL13P35225 146 aa21.34■■□□□ 1.01
CDKN1B-201ENST00000228872 SPDYE4A6NLX3 237 aa21.33■■□□□ 1.01
CDKN1B-201ENST00000228872 NOL8Q76FK4 1167 aaKnown RBP21.33■■□□□ 1.01
CDKN1B-201ENST00000228872 TMEM94Q12767 1356 aa21.33■■□□□ 1.01
CDKN1B-201ENST00000228872 HCLS1P14317 486 aaPredicted RBP21.32■■□□□ 1
CDKN1B-201ENST00000228872 C1orf167Q5SNV9 1468 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 RTL1A6NKG5 1358 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 ANKRD7Q92527 254 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 TMEM87AQ8NBN3 555 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 PALD1Q9ULE6 856 aa21.32■■□□□ 1
CDKN1B-201ENST00000228872 KDM4AO75164 1064 aa21.31■■□□□ 1
CDKN1B-201ENST00000228872 OSBPL3Q9H4L5 887 aa21.31■■□□□ 1
CDKN1B-201ENST00000228872 DIAPH3Q9NSV4 1193 aa21.31■■□□□ 1
CDKN1B-201ENST00000228872 RIOK3O14730 519 aaKnown RBP21.31■■□□□ 1
CDKN1B-201ENST00000228872 FGD1P98174 961 aa21.31■■□□□ 1
CDKN1B-201ENST00000228872 KIAA1524Q8TCG1 905 aa21.31■■□□□ 1
CDKN1B-201ENST00000228872 WDR33Q9C0J8 1336 aaKnown RBP21.3■■□□□ 1
CDKN1B-201ENST00000228872 RGS12O14924 1447 aa21.3■■□□□ 1
CDKN1B-201ENST00000228872 TRPM3Q9HCF6 1732 aaPredicted RBP21.3■■□□□ 1
CDKN1B-201ENST00000228872 MCCP23508 829 aa21.3■■□□□ 1
CDKN1B-201ENST00000228872 PDE1AP54750 535 aa21.3■■□□□ 1
CDKN1B-201ENST00000228872 ESYT1Q9BSJ8 1104 aa21.3■■□□□ 1
CDKN1B-201ENST00000228872 MX1P20591 662 aa21.29■■□□□ 1
CDKN1B-201ENST00000228872 MST1RQ04912 1400 aa21.29■■□□□ 1
CDKN1B-201ENST00000228872 U2AF2P26368 475 aaKnown RBP eCLIP21.29■■□□□ 16e-7■■■■□ 26.4
CDKN1B-201ENST00000228872 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
CDKN1B-201ENST00000228872 MSH6P52701 1360 aa21.29■■□□□ 1
CDKN1B-201ENST00000228872 ANAPC15P60006 121 aa21.28■■□□□ 1
CDKN1B-201ENST00000228872 CHAF1AQ13111 956 aaPredicted RBP21.28■■□□□ 1
CDKN1B-201ENST00000228872 PYCARDQ9ULZ3 195 aa21.28■■□□□ 1
CDKN1B-201ENST00000228872 KCNF1Q9H3M0 494 aa21.28■■□□□ 1
CDKN1B-201ENST00000228872 KRT24Q2M2I5 525 aa21.27■■□□□ 1
CDKN1B-201ENST00000228872 MEIS3Q99687 375 aa21.27■■□□□ 1
CDKN1B-201ENST00000228872 RPAP1Q9BWH6 1393 aaPredicted RBP21.27■■□□□ 1
CDKN1B-201ENST00000228872 CTIFO43310 598 aaKnown RBP21.27■■□□□ 1
CDKN1B-201ENST00000228872 NLRP6P59044 892 aa21.27■■□□□ 1
CDKN1B-201ENST00000228872 LMOD3Q0VAK6 560 aa21.27■■□□□ 1
CDKN1B-201ENST00000228872 ORAI2Q96SN7 254 aa21.27■■□□□ 1
CDKN1B-201ENST00000228872 SRCIN1Q9C0H9 1055 aa21.27■■□□□ 1
CDKN1B-201ENST00000228872 ABTB2Q8N961 1025 aa21.26■□□□□ 0.99
CDKN1B-201ENST00000228872 SBNO1A3KN83 1393 aa21.25■□□□□ 0.99
CDKN1B-201ENST00000228872 PSME1Q06323 249 aa21.25■□□□□ 0.99
CDKN1B-201ENST00000228872 CNPY2Q9Y2B0 182 aa21.25■□□□□ 0.99
CDKN1B-201ENST00000228872 AP5Z1O43299 807 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 ATF3P18847 181 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 IL17RAQ96F46 866 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 LTN1O94822 1766 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 FAM83GA6ND36 823 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 TPM3P06753 285 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 FUCA2Q9BTY2 467 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 UPF3BQ9BZI7 483 aaKnown RBP21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 MAP3K19Q56UN5 1328 aa21.24■□□□□ 0.99
CDKN1B-201ENST00000228872 PLCB2Q00722 1185 aa21.23■□□□□ 0.99
CDKN1B-201ENST00000228872 ANO2Q9NQ90 1003 aa21.23■□□□□ 0.99
CDKN1B-201ENST00000228872 FLT4P35916 1363 aa21.23■□□□□ 0.99
CDKN1B-201ENST00000228872 UBE2HP62256 183 aa21.23■□□□□ 0.99
CDKN1B-201ENST00000228872 FEZ1Q99689 392 aa21.23■□□□□ 0.99
CDKN1B-201ENST00000228872 HMMRO75330 724 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 TSHZ3Q63HK5 1081 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 PHRF1Q9P1Y6 1649 aaKnown RBP21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 NFAT5O94916 1531 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 IGSF3O75054 1194 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 DCTN1Q14203 1278 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 EIF4A2Q14240 407 aaKnown RBP21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 TPRNQ4KMQ1 711 aa21.22■□□□□ 0.99
CDKN1B-201ENST00000228872 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
CDKN1B-201ENST00000228872 CHMLP26374 656 aa21.21■□□□□ 0.99
CDKN1B-201ENST00000228872 SALL3Q9BXA9 1300 aa21.2■□□□□ 0.98
CDKN1B-201ENST00000228872 SOX12O15370 315 aa21.2■□□□□ 0.98
CDKN1B-201ENST00000228872 SLIT3O75094 1523 aa21.2■□□□□ 0.98
CDKN1B-201ENST00000228872 ZSCAN22P10073 491 aaPredicted RBP21.2■□□□□ 0.98
CDKN1B-201ENST00000228872 GIMAP6Q6P9H5 292 aa21.2■□□□□ 0.98
CDKN1B-201ENST00000228872 OGFRQ9NZT2 677 aa21.2■□□□□ 0.98
CDKN1B-201ENST00000228872 FOXO3O43524 673 aa21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 SPC24Q8NBT2 197 aa21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 KIAA0232Q92628 1395 aa21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 NCBP1Q09161 790 aaKnown RBP21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 KLHL34Q8N239 644 aa21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 PTPRCP08575 1304 aa21.19■□□□□ 0.98
CDKN1B-201ENST00000228872 GOLGA6L6A8MZA4 724 aa21.18■□□□□ 0.98
CDKN1B-201ENST00000228872 TAF3Q5VWG9 929 aa21.18■□□□□ 0.98
CDKN1B-201ENST00000228872 NUTM2GQ5VZR2 741 aa21.18■□□□□ 0.98
CDKN1B-201ENST00000228872 AEBP1Q8IUX7 1158 aa21.18■□□□□ 0.98
CDKN1B-201ENST00000228872 TCHHQ07283 1943 aa21.17■□□□□ 0.98
CDKN1B-201ENST00000228872 ZNF335Q9H4Z2 1342 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms