RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 KRT28Q7Z3Y7 464 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 FOXD4L4Q8WXT5 416 aaPredicted RBP21.27■■□□□ 1
PRPF19-201ENST00000227524 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
PRPF19-201ENST00000227524 LRRCC1Q9C099 1032 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 BRD1O95696 1058 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 MBD3O95983 291 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 MX1P20591 662 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 IP6K1Q92551 441 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 SYCE3A1L190 88 aa21.26■□□□□ 0.99
PRPF19-201ENST00000227524 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
PRPF19-201ENST00000227524 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
PRPF19-201ENST00000227524 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.26■□□□□ 0.99
PRPF19-201ENST00000227524 ANAPC15P60006 121 aa21.25■□□□□ 0.99
PRPF19-201ENST00000227524 ZNF500O60304 480 aaPredicted RBP21.24■□□□□ 0.99
PRPF19-201ENST00000227524 GCP02774 474 aa21.24■□□□□ 0.99
PRPF19-201ENST00000227524 CHMLP26374 656 aa21.24■□□□□ 0.99
PRPF19-201ENST00000227524 LTV1Q96GA3 475 aaPredicted RBP21.24■□□□□ 0.99
PRPF19-201ENST00000227524 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
PRPF19-201ENST00000227524 CACNA1FO60840 1977 aa21.24■□□□□ 0.99
PRPF19-201ENST00000227524 GNAI3P08754 354 aa21.24■□□□□ 0.99
PRPF19-201ENST00000227524 PNMA6EA0A0J9YXQ4 647 aa21.23■□□□□ 0.99
PRPF19-201ENST00000227524 DDX17Q92841 729 aaKnown RBP21.23■□□□□ 0.99
PRPF19-201ENST00000227524 INTS4Q96HW7 963 aaKnown RBP21.23■□□□□ 0.99
PRPF19-201ENST00000227524 RGPD2P0DJD1 1756 aa21.23■□□□□ 0.99
PRPF19-201ENST00000227524 TERF1P54274 439 aa21.23■□□□□ 0.99
PRPF19-201ENST00000227524 ATP8B2P98198 1209 aa21.23■□□□□ 0.99
PRPF19-201ENST00000227524 CADPS2Q86UW7 1296 aa21.23■□□□□ 0.99
PRPF19-201ENST00000227524 ANO2Q9NQ90 1003 aa21.23■□□□□ 0.99
PRPF19-201ENST00000227524 FLIIQ13045 1269 aa21.22■□□□□ 0.99
PRPF19-201ENST00000227524 ARHGEF25Q86VW2 580 aa21.22■□□□□ 0.99
PRPF19-201ENST00000227524 RILPL2Q969X0 211 aa21.22■□□□□ 0.99
PRPF19-201ENST00000227524 IL17RAQ96F46 866 aa21.22■□□□□ 0.99
PRPF19-201ENST00000227524 STAP2Q9UGK3 403 aa21.22■□□□□ 0.99
PRPF19-201ENST00000227524 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
PRPF19-201ENST00000227524 TRIM6-TRIM34B2RNG4 842 aa21.21■□□□□ 0.99
PRPF19-201ENST00000227524 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
PRPF19-201ENST00000227524 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
PRPF19-201ENST00000227524 FKBP5Q13451 457 aaPredicted RBP21.2■□□□□ 0.98
PRPF19-201ENST00000227524 NOL8Q76FK4 1167 aaKnown RBP21.2■□□□□ 0.98
PRPF19-201ENST00000227524 SRCIN1Q9C0H9 1055 aa21.2■□□□□ 0.98
PRPF19-201ENST00000227524 ZNF335Q9H4Z2 1342 aaPredicted RBP21.2■□□□□ 0.98
PRPF19-201ENST00000227524 CCDC30Q5VVM6 783 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 NBPF6Q5VWK0 638 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 NBPF4Q96M43 638 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 AOX1Q06278 1338 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 PXDNLA1KZ92 1463 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 PLEKHG5O94827 1062 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 CCDC39Q9UFE4 941 aa21.19■□□□□ 0.98
PRPF19-201ENST00000227524 MCM5P33992 734 aa21.18■□□□□ 0.98
PRPF19-201ENST00000227524 UNC5CLQ8IV45 518 aa21.18■□□□□ 0.98
PRPF19-201ENST00000227524 LRRFIP2Q9Y608 721 aaKnown RBP21.18■□□□□ 0.98
PRPF19-201ENST00000227524 PXDNQ92626 1479 aa21.17■□□□□ 0.98
PRPF19-201ENST00000227524 R3HCC1Q9Y3T6 440 aaKnown RBP21.17■□□□□ 0.98
PRPF19-201ENST00000227524 ZBTB7CA1YPR0 619 aa21.16■□□□□ 0.98
PRPF19-201ENST00000227524 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
PRPF19-201ENST00000227524 RNF214Q8ND24 703 aa21.16■□□□□ 0.98
PRPF19-201ENST00000227524 UPF3BQ9BZI7 483 aaKnown RBP21.16■□□□□ 0.98
PRPF19-201ENST00000227524 TSPY26PQ9H489 355 aa21.16■□□□□ 0.98
PRPF19-201ENST00000227524 SYAP1Q96A49 352 aaPredicted RBP21.16■□□□□ 0.98
PRPF19-201ENST00000227524 PDCL3Q9H2J4 239 aa21.16■□□□□ 0.98
PRPF19-201ENST00000227524 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
PRPF19-201ENST00000227524 NECTIN2Q92692 538 aa21.15■□□□□ 0.98
PRPF19-201ENST00000227524 AXIN2Q9Y2T1 843 aa21.15■□□□□ 0.98
PRPF19-201ENST00000227524 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
PRPF19-201ENST00000227524 EPB41L2O43491 1005 aaKnown RBP21.14■□□□□ 0.98
PRPF19-201ENST00000227524 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.98
PRPF19-201ENST00000227524 NPHP3Q7Z494 1330 aa21.14■□□□□ 0.98
PRPF19-201ENST00000227524 TCHHQ07283 1943 aa21.14■□□□□ 0.97
PRPF19-201ENST00000227524 IL25Q9H293 177 aa21.14■□□□□ 0.97
PRPF19-201ENST00000227524 CRYBG1Q9Y4K1 1723 aa21.13■□□□□ 0.97
PRPF19-201ENST00000227524 SOS1Q07889 1333 aaPredicted RBP21.13■□□□□ 0.97
PRPF19-201ENST00000227524 WDR33Q9C0J8 1336 aaKnown RBP21.13■□□□□ 0.97
PRPF19-201ENST00000227524 CAMTA1Q9Y6Y1 1673 aa21.13■□□□□ 0.97
PRPF19-201ENST00000227524 HSPA4P34932 840 aa21.13■□□□□ 0.97
PRPF19-201ENST00000227524 CSPP1Q1MSJ5 1256 aa21.13■□□□□ 0.97
PRPF19-201ENST00000227524 TNS3Q68CZ2 1445 aa21.12■□□□□ 0.97
PRPF19-201ENST00000227524 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
PRPF19-201ENST00000227524 GADD45BO75293 160 aaPredicted RBP21.12■□□□□ 0.97
PRPF19-201ENST00000227524 BRINP3Q76B58 766 aa21.12■□□□□ 0.97
PRPF19-201ENST00000227524 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
PRPF19-201ENST00000227524 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
PRPF19-201ENST00000227524 UBTFL1P0CB47 393 aaPredicted RBP21.12■□□□□ 0.97
PRPF19-201ENST00000227524 IL1RAPL2Q9NP60 686 aa21.12■□□□□ 0.97
PRPF19-201ENST00000227524 RPAP1Q9BWH6 1393 aaPredicted RBP21.11■□□□□ 0.97
PRPF19-201ENST00000227524 PHF14O94880 888 aa21.11■□□□□ 0.97
PRPF19-201ENST00000227524 SSH3Q8TE77 659 aa21.11■□□□□ 0.97
PRPF19-201ENST00000227524 GDPD2Q9HCC8 539 aa21.11■□□□□ 0.97
PRPF19-201ENST00000227524 MAP3K5Q99683 1374 aa21.11■□□□□ 0.97
PRPF19-201ENST00000227524 FOXD4L6Q3SYB3 417 aaPredicted RBP21.1■□□□□ 0.97
PRPF19-201ENST00000227524 FOXD4L3Q6VB84 417 aaPredicted RBP21.1■□□□□ 0.97
PRPF19-201ENST00000227524 USP48Q86UV5 1035 aa21.1■□□□□ 0.97
PRPF19-201ENST00000227524 NUTM1Q86Y26 1132 aa21.1■□□□□ 0.97
PRPF19-201ENST00000227524 IL17REQ8NFR9 667 aa21.1■□□□□ 0.97
PRPF19-201ENST00000227524 COL18A1P39060 1754 aa21.1■□□□□ 0.97
PRPF19-201ENST00000227524 ZC3H6P61129 1189 aaKnown RBP21.09■□□□□ 0.97
PRPF19-201ENST00000227524 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
PRPF19-201ENST00000227524 RAB11FIP3O75154 756 aa21.09■□□□□ 0.97
PRPF19-201ENST00000227524 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
PRPF19-201ENST00000227524 RAD50Q92878 1312 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms