RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 TTC21BQ7Z4L5 1316 aa7.85□□□□□ -1.15
AFP-201ENST00000226359 CPDO75976 1380 aa7.85□□□□□ -1.15
AFP-201ENST00000226359 MDM2Q00987 491 aaPredicted RBP7.85□□□□□ -1.15
AFP-201ENST00000226359 SEPT12Q8IYM1 358 aa7.85□□□□□ -1.15
AFP-201ENST00000226359 ADGRG1Q9Y653 693 aa7.85□□□□□ -1.15
AFP-201ENST00000226359 PLCH1Q4KWH8 1693 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 ST20-MTHFSA0A0A6YYL1 179 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 C3orf80F5H4A9 247 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 PTPREP23469 700 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 CHRNA2Q15822 529 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 TTC13Q8NBP0 860 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 TRAIPQ9BWF2 469 aa7.84□□□□□ -1.15
AFP-201ENST00000226359 PHRF1Q9P1Y6 1649 aaKnown RBP7.84□□□□□ -1.15
AFP-201ENST00000226359 GCP02774 474 aa7.84□□□□□ -1.16
AFP-201ENST00000226359 CCDC125Q86Z20 511 aa7.84□□□□□ -1.16
AFP-201ENST00000226359 KCNK17Q96T54 332 aa7.84□□□□□ -1.16
AFP-201ENST00000226359 RBM27Q9P2N5 1060 aaKnown RBP7.84□□□□□ -1.16
AFP-201ENST00000226359 TSKSQ9UJT2 592 aa7.84□□□□□ -1.16
AFP-201ENST00000226359 EDC4Q6P2E9 1401 aaKnown RBP7.83□□□□□ -1.16
AFP-201ENST00000226359 NRKQ7Z2Y5 1582 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 PPP1R3GB7ZBB8 358 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 FAM98CQ17RN3 349 aaKnown RBP7.83□□□□□ -1.16
AFP-201ENST00000226359 TRAF7Q6Q0C0 670 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 KRT27Q7Z3Y8 459 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.83□□□□□ -1.16
AFP-201ENST00000226359 PXYLP1Q8TE99 480 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 SPATA31A5Q5VU36 1347 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 SPATA31A7Q8IWB4 1347 aa7.83□□□□□ -1.16
AFP-201ENST00000226359 SSH2Q76I76 1423 aa7.82□□□□□ -1.16
AFP-201ENST00000226359 RAD21O60216 631 aa7.82□□□□□ -1.16
AFP-201ENST00000226359 CSB-PGBD3P0DP91 1061 aa7.82□□□□□ -1.16
AFP-201ENST00000226359 PROX2Q3B8N5 592 aa7.82□□□□□ -1.16
AFP-201ENST00000226359 GLI3P10071 1580 aa7.82□□□□□ -1.16
AFP-201ENST00000226359 CPSF1Q10570 1443 aaKnown RBP7.82□□□□□ -1.16
AFP-201ENST00000226359 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
AFP-201ENST00000226359 SLIT3O75094 1523 aa7.81□□□□□ -1.16
AFP-201ENST00000226359 AATKQ6ZMQ8 1374 aa7.81□□□□□ -1.16
AFP-201ENST00000226359 PSEN2P49810 448 aa7.81□□□□□ -1.16
AFP-201ENST00000226359 TCP11L2Q8N4U5 519 aa7.81□□□□□ -1.16
AFP-201ENST00000226359 SPATA31A1Q5TZJ5 1347 aa7.81□□□□□ -1.16
AFP-201ENST00000226359 C11orf95C9JLR9 678 aaPredicted RBP7.8□□□□□ -1.16
AFP-201ENST00000226359 PDE3BQ13370 1112 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 CCDC97Q96F63 343 aaPredicted RBP7.8□□□□□ -1.16
AFP-201ENST00000226359 COG3Q96JB2 828 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 TESK2Q96S53 571 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 SLC12A5Q9H2X9 1139 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 GPCPD1Q9NPB8 672 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 USP35Q9P2H5 1018 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 A0A1W2PP64 1363 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 ANKRD36BQ8N2N9 1353 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 BLMP54132 1417 aaPredicted RBP7.8□□□□□ -1.16
AFP-201ENST00000226359 NRAPQ86VF7 1730 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 CRYBG1Q9Y4K1 1723 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 OATP04181 439 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
AFP-201ENST00000226359 POLR3GLQ9BT43 218 aa7.8□□□□□ -1.16
AFP-201ENST00000226359 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 ABCC6O95255 1503 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 SMAPO00193 183 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 CLCN1P35523 988 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 BAG6P46379 1132 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 PTPN5P54829 565 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 NUDT18Q6ZVK8 323 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 RETREG2Q8NC44 543 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
AFP-201ENST00000226359 CRB1P82279 1406 aa7.79□□□□□ -1.16
AFP-201ENST00000226359 COL5A2P05997 1499 aaPredicted RBP7.79□□□□□ -1.16
AFP-201ENST00000226359 PIK3C2AO00443 1686 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 SH3D19Q5HYK7 790 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 LARP1Q6PKG0 1096 aaKnown RBP7.78□□□□□ -1.16
AFP-201ENST00000226359 NME9Q86XW9 330 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 PROCA1Q8NCQ7 364 aaPredicted RBP7.78□□□□□ -1.16
AFP-201ENST00000226359 SERPINA10Q9UK55 444 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 AKAP12Q02952 1782 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 TRIM6-TRIM34B2RNG4 842 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 FAM196AQ6ZSG2 479 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 ARHGEF25Q86VW2 580 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 RGS22Q8NE09 1264 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 WDR17Q8IZU2 1322 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 CCDC7Q96M83 1385 aa7.78□□□□□ -1.16
AFP-201ENST00000226359 MON2Q7Z3U7 1717 aa7.77□□□□□ -1.16
AFP-201ENST00000226359 RBM46Q8TBY0 533 aaKnown RBP7.77□□□□□ -1.17
AFP-201ENST00000226359 MTMR7Q9Y216 660 aa7.77□□□□□ -1.17
AFP-201ENST00000226359 CD163L1Q9NR16 1453 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 SMG6Q86US8 1419 aaKnown RBP7.76□□□□□ -1.17
AFP-201ENST00000226359 EYA1Q99502 592 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 ZBED2Q9BTP6 218 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
AFP-201ENST00000226359 PNMA3Q9UL41 463 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 LMO7Q8WWI1 1683 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 CAMTA1Q9Y6Y1 1673 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 RCCD1A6NED2 376 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 SSTR3P32745 418 aaPredicted RBP7.76□□□□□ -1.17
AFP-201ENST00000226359 AMPHP49418 695 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 IRF5Q13568 498 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 DDB1Q16531 1140 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 ZNF428Q96B54 188 aa7.76□□□□□ -1.17
AFP-201ENST00000226359 CARD10Q9BWT7 1032 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms