RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ATP6V1AP38606 617 aa18.02■□□□□ 0.48
SEC61B-201ENST00000223641 ITPK1Q13572 414 aa18.02■□□□□ 0.48
SEC61B-201ENST00000223641 STARD3NLO95772 234 aa18.01■□□□□ 0.47
SEC61B-201ENST00000223641 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
SEC61B-201ENST00000223641 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
SEC61B-201ENST00000223641 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
SEC61B-201ENST00000223641 DBF4Q9UBU7 674 aaPredicted RBP18.01■□□□□ 0.47
SEC61B-201ENST00000223641 APBA3O96018 575 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 SLC4A2P04920 1241 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 PROM2Q8N271 834 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 NECTIN2Q92692 538 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 STK31Q9BXU1 1019 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 CHPF2Q9P2E5 772 aa18■□□□□ 0.47
SEC61B-201ENST00000223641 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
SEC61B-201ENST00000223641 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
SEC61B-201ENST00000223641 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
SEC61B-201ENST00000223641 SLC27A3Q5K4L6 730 aa17.99■□□□□ 0.47
SEC61B-201ENST00000223641 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
SEC61B-201ENST00000223641 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 NBPF26B4DH59 902 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 A1BGP04217 495 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 NBPF10Q6P3W6 841 aaKnown RBP17.98■□□□□ 0.47
SEC61B-201ENST00000223641 NBPF15Q8N660 670 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
SEC61B-201ENST00000223641 RRP1P56182 461 aaKnown RBP17.97■□□□□ 0.47
SEC61B-201ENST00000223641 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
SEC61B-201ENST00000223641 RC3H1Q5TC82 1133 aaKnown RBP17.97■□□□□ 0.47
SEC61B-201ENST00000223641 INTS5Q6P9B9 1019 aaKnown RBP17.97■□□□□ 0.47
SEC61B-201ENST00000223641 G2E3Q7L622 706 aa17.97■□□□□ 0.47
SEC61B-201ENST00000223641 CCDC125Q86Z20 511 aa17.97■□□□□ 0.47
SEC61B-201ENST00000223641 LINC00116Q8NCU8 138 aa17.97■□□□□ 0.47
SEC61B-201ENST00000223641 HYPKQ9NX55 129 aa17.97■□□□□ 0.47
SEC61B-201ENST00000223641 CNTNAP4Q9C0A0 1308 aa17.97■□□□□ 0.47
SEC61B-201ENST00000223641 TXNRD1Q16881 649 aa17.96■□□□□ 0.47
SEC61B-201ENST00000223641 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.47
SEC61B-201ENST00000223641 PTPRCP08575 1304 aa17.96■□□□□ 0.46
SEC61B-201ENST00000223641 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
SEC61B-201ENST00000223641 ANXA1P04083 346 aa17.95■□□□□ 0.46
SEC61B-201ENST00000223641 HMGB2P26583 209 aaKnown RBP17.95■□□□□ 0.46
SEC61B-201ENST00000223641 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
SEC61B-201ENST00000223641 KCNQ4P56696 695 aa17.95■□□□□ 0.46
SEC61B-201ENST00000223641 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
SEC61B-201ENST00000223641 CAMKK2Q96RR4 588 aa17.95■□□□□ 0.46
SEC61B-201ENST00000223641 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
SEC61B-201ENST00000223641 CCDC87Q9NVE4 849 aa17.95■□□□□ 0.46
SEC61B-201ENST00000223641 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
SEC61B-201ENST00000223641 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
SEC61B-201ENST00000223641 FLIIQ13045 1269 aa17.94■□□□□ 0.46
SEC61B-201ENST00000223641 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
SEC61B-201ENST00000223641 MYL6BP14649 208 aa17.93■□□□□ 0.46
SEC61B-201ENST00000223641 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
SEC61B-201ENST00000223641 ATF7IPQ6VMQ6 1270 aa17.93■□□□□ 0.46
SEC61B-201ENST00000223641 PLIN1O60240 522 aa17.92■□□□□ 0.46
SEC61B-201ENST00000223641 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
SEC61B-201ENST00000223641 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
SEC61B-201ENST00000223641 FRAT1Q92837 279 aaPredicted RBP17.92■□□□□ 0.46
SEC61B-201ENST00000223641 TRIM27P14373 513 aa17.91■□□□□ 0.46
SEC61B-201ENST00000223641 BAG6P46379 1132 aa17.91■□□□□ 0.46
SEC61B-201ENST00000223641 SF3B2Q13435 895 aaKnown RBP17.91■□□□□ 0.46
SEC61B-201ENST00000223641 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
SEC61B-201ENST00000223641 COPS6Q7L5N1 327 aa17.91■□□□□ 0.46
SEC61B-201ENST00000223641 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
SEC61B-201ENST00000223641 RPS6KA4O75676 772 aa17.9■□□□□ 0.46
SEC61B-201ENST00000223641 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
SEC61B-201ENST00000223641 EN1Q05925 392 aaPredicted RBP17.9■□□□□ 0.46
SEC61B-201ENST00000223641 XAGE3Q8WTP9 111 aa17.9■□□□□ 0.46
SEC61B-201ENST00000223641 API5Q9BZZ5 524 aaKnown RBP17.9■□□□□ 0.46
SEC61B-201ENST00000223641 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
SEC61B-201ENST00000223641 TNNQ9UQP3 1299 aa17.89■□□□□ 0.45
SEC61B-201ENST00000223641 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.45
SEC61B-201ENST00000223641 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
SEC61B-201ENST00000223641 MS4A1P11836 297 aa17.88■□□□□ 0.45
SEC61B-201ENST00000223641 FKBP5Q13451 457 aaPredicted RBP17.88■□□□□ 0.45
SEC61B-201ENST00000223641 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
SEC61B-201ENST00000223641 UPF1Q92900 1129 aaKnown RBP eCLIP17.88■□□□□ 0.45
SEC61B-201ENST00000223641 ABCC4O15439 1325 aa17.88■□□□□ 0.45
SEC61B-201ENST00000223641 ADCY9O60503 1353 aa17.88■□□□□ 0.45
SEC61B-201ENST00000223641 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 DDX58O95786 925 aaKnown RBP17.87■□□□□ 0.45
SEC61B-201ENST00000223641 C20orf194Q5TEA3 1177 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 TTLL7Q6ZT98 887 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 ANKRD13DQ6ZTN6 518 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 DEFB132Q7Z7B7 95 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 DZIP1LQ8IYY4 767 aaKnown RBP17.87■□□□□ 0.45
SEC61B-201ENST00000223641 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 AKT1S1Q96B36 256 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
SEC61B-201ENST00000223641 RLBP1P12271 317 aa17.86■□□□□ 0.45
SEC61B-201ENST00000223641 AIMP1Q12904 312 aaKnown RBP17.86■□□□□ 0.45
SEC61B-201ENST00000223641 ILDR2Q71H61 639 aa17.86■□□□□ 0.45
SEC61B-201ENST00000223641 PLBD2Q8NHP8 589 aa17.86■□□□□ 0.45
SEC61B-201ENST00000223641 COL15A1P39059 1388 aa17.86■□□□□ 0.45
SEC61B-201ENST00000223641 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
SEC61B-201ENST00000223641 BCORQ6W2J9 1755 aa17.85■□□□□ 0.45
SEC61B-201ENST00000223641 AMIGO3Q86WK7 504 aa17.85■□□□□ 0.45
SEC61B-201ENST00000223641 RTCBQ9Y3I0 505 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms