RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 C4AP0C0L4 1744 aa25.72■■□□□ 1.71
HOXA6-201ENST00000222728 CNTNAP4Q9C0A0 1308 aa25.72■■□□□ 1.71
HOXA6-201ENST00000222728 AMIGO3Q86WK7 504 aa25.72■■□□□ 1.71
HOXA6-201ENST00000222728 TFCP2L1Q9NZI6 479 aa25.72■■□□□ 1.71
HOXA6-201ENST00000222728 FANCIQ9NVI1 1328 aa25.71■■□□□ 1.71
HOXA6-201ENST00000222728 GNPATO15228 680 aa25.71■■□□□ 1.71
HOXA6-201ENST00000222728 INTS5Q6P9B9 1019 aaKnown RBP25.71■■□□□ 1.71
HOXA6-201ENST00000222728 TEX13AQ9BXU3 409 aaPredicted RBP25.71■■□□□ 1.71
HOXA6-201ENST00000222728 CASZ1Q86V15 1759 aa25.7■■□□□ 1.7
HOXA6-201ENST00000222728 STARD3NLO95772 234 aa25.7■■□□□ 1.7
HOXA6-201ENST00000222728 GOLGA2Q08379 1002 aa25.7■■□□□ 1.7
HOXA6-201ENST00000222728 CDCA7LQ96GN5 454 aa25.7■■□□□ 1.7
HOXA6-201ENST00000222728 CCDC87Q9NVE4 849 aa25.7■■□□□ 1.7
HOXA6-201ENST00000222728 PHF14O94880 888 aa25.69■■□□□ 1.7
HOXA6-201ENST00000222728 A1BGP04217 495 aa25.69■■□□□ 1.7
HOXA6-201ENST00000222728 PIP4K2AP48426 406 aaPredicted RBP25.69■■□□□ 1.7
HOXA6-201ENST00000222728 RC3H1Q5TC82 1133 aaKnown RBP25.69■■□□□ 1.7
HOXA6-201ENST00000222728 ZBTB1Q9Y2K1 713 aa25.69■■□□□ 1.7
HOXA6-201ENST00000222728 ELL2O00472 640 aaPredicted RBP25.68■■□□□ 1.7
HOXA6-201ENST00000222728 HMGB2P26583 209 aaKnown RBP25.68■■□□□ 1.7
HOXA6-201ENST00000222728 C8orf58Q8NAV2 365 aa25.68■■□□□ 1.7
HOXA6-201ENST00000222728 PDGFDQ9GZP0 370 aaPredicted RBP25.68■■□□□ 1.7
HOXA6-201ENST00000222728 PNPLA7Q6ZV29 1317 aa25.67■■□□□ 1.7
HOXA6-201ENST00000222728 EIF2S2P20042 333 aaKnown RBP25.67■■□□□ 1.7
HOXA6-201ENST00000222728 CANXP27824 592 aaKnown RBP25.67■■□□□ 1.7
HOXA6-201ENST00000222728 DUSP27Q5VZP5 1158 aa25.67■■□□□ 1.7
HOXA6-201ENST00000222728 NECTIN2Q92692 538 aa25.67■■□□□ 1.7
HOXA6-201ENST00000222728 MYH16Q9H6N6 1097 aa25.67■■□□□ 1.7
HOXA6-201ENST00000222728 TSPYL6Q8N831 410 aa25.65■■□□□ 1.7
HOXA6-201ENST00000222728 RTCBQ9Y3I0 505 aaKnown RBP25.65■■□□□ 1.7
HOXA6-201ENST00000222728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.64■■□□□ 1.7
HOXA6-201ENST00000222728 RPS6KA4O75676 772 aa25.64■■□□□ 1.7
HOXA6-201ENST00000222728 SLFN5Q08AF3 891 aa25.64■■□□□ 1.7
HOXA6-201ENST00000222728 E9PSI1 815 aa25.63■■□□□ 1.69
HOXA6-201ENST00000222728 EXOSC9Q06265 439 aaKnown RBP25.63■■□□□ 1.69
HOXA6-201ENST00000222728 COL23A1Q86Y22 540 aaPredicted RBP25.63■■□□□ 1.69
HOXA6-201ENST00000222728 ZNF330Q9Y3S2 320 aaPredicted RBP25.63■■□□□ 1.69
HOXA6-201ENST00000222728 CACNA1FO60840 1977 aa25.63■■□□□ 1.69
HOXA6-201ENST00000222728 SOS1Q07889 1333 aaPredicted RBP25.63■■□□□ 1.69
HOXA6-201ENST00000222728 NBPF26B4DH59 902 aa25.62■■□□□ 1.69
HOXA6-201ENST00000222728 MSH5O43196 834 aa25.62■■□□□ 1.69
HOXA6-201ENST00000222728 NBPF10Q6P3W6 841 aaKnown RBP25.62■■□□□ 1.69
HOXA6-201ENST00000222728 NBPF15Q8N660 670 aa25.62■■□□□ 1.69
HOXA6-201ENST00000222728 ZBED9Q6R2W3 1325 aa25.62■■□□□ 1.69
HOXA6-201ENST00000222728 SSFA2P28290 1259 aa25.61■■□□□ 1.69
HOXA6-201ENST00000222728 HDGFL1Q5TGJ6 251 aa25.6■■□□□ 1.69
HOXA6-201ENST00000222728 YTHDC1Q96MU7 727 aaKnown RBP25.6■■□□□ 1.69
HOXA6-201ENST00000222728 COL15A1P39059 1388 aa25.59■■□□□ 1.69
HOXA6-201ENST00000222728 HOXB7P09629 217 aa25.59■■□□□ 1.69
HOXA6-201ENST00000222728 TWISTNBQ3B726 338 aaPredicted RBP25.59■■□□□ 1.69
HOXA6-201ENST00000222728 TRAPPC3LQ5T215 181 aa25.59■■□□□ 1.69
HOXA6-201ENST00000222728 ANXA1P04083 346 aa25.58■■□□□ 1.69
HOXA6-201ENST00000222728 MYL6BP14649 208 aa25.58■■□□□ 1.69
HOXA6-201ENST00000222728 ARHGEF1Q92888 912 aaKnown RBP25.58■■□□□ 1.69
HOXA6-201ENST00000222728 BCORQ6W2J9 1755 aa25.58■■□□□ 1.69
HOXA6-201ENST00000222728 EIF5P55010 431 aaKnown RBP25.57■■□□□ 1.68
HOXA6-201ENST00000222728 PROSER3Q2NL68 480 aa25.57■■□□□ 1.68
HOXA6-201ENST00000222728 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
HOXA6-201ENST00000222728 IL6STP40189 918 aaPredicted RBP25.56■■□□□ 1.68
HOXA6-201ENST00000222728 PDIA6Q15084 440 aa25.56■■□□□ 1.68
HOXA6-201ENST00000222728 TRMT2AQ8IZ69 625 aaKnown RBP25.56■■□□□ 1.68
HOXA6-201ENST00000222728 CHPF2Q9P2E5 772 aa25.56■■□□□ 1.68
HOXA6-201ENST00000222728 NUP98P52948 1817 aa25.56■■□□□ 1.68
HOXA6-201ENST00000222728 SCN7AQ01118 1682 aa25.55■■□□□ 1.68
HOXA6-201ENST00000222728 TCERG1O14776 1098 aaKnown RBP25.55■■□□□ 1.68
HOXA6-201ENST00000222728 ZBTB7AO95365 584 aa25.55■■□□□ 1.68
HOXA6-201ENST00000222728 ADRA2BP18089 450 aa25.55■■□□□ 1.68
HOXA6-201ENST00000222728 ARXQ96QS3 562 aa25.55■■□□□ 1.68
HOXA6-201ENST00000222728 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
HOXA6-201ENST00000222728 RFC4P35249 363 aa25.54■■□□□ 1.68
HOXA6-201ENST00000222728 ERBB4Q15303 1308 aa25.54■■□□□ 1.68
HOXA6-201ENST00000222728 VAMP4O75379 141 aa25.53■■□□□ 1.68
HOXA6-201ENST00000222728 TBC1D2BQ9UPU7 963 aa25.53■■□□□ 1.68
HOXA6-201ENST00000222728 COL24A1Q17RW2 1714 aa25.53■■□□□ 1.68
HOXA6-201ENST00000222728 MSL1Q68DK7 614 aa25.52■■□□□ 1.68
HOXA6-201ENST00000222728 NPM2Q86SE8 214 aaKnown RBP25.52■■□□□ 1.68
HOXA6-201ENST00000222728 DDX21Q9NR30 783 aaKnown RBP eCLIP25.51■■□□□ 1.67
HOXA6-201ENST00000222728 A0A087WZG4 1122 aa25.5■■□□□ 1.67
HOXA6-201ENST00000222728 CCDC30Q5VVM6 783 aa25.5■■□□□ 1.67
HOXA6-201ENST00000222728 LRP10Q7Z4F1 713 aa25.5■■□□□ 1.67
HOXA6-201ENST00000222728 USP42Q9H9J4 1324 aaKnown RBP25.5■■□□□ 1.67
HOXA6-201ENST00000222728 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
HOXA6-201ENST00000222728 ZPR1O75312 459 aa25.49■■□□□ 1.67
HOXA6-201ENST00000222728 USPL1Q5W0Q7 1092 aa25.49■■□□□ 1.67
HOXA6-201ENST00000222728 DZIP3Q86Y13 1208 aaKnown RBP25.49■■□□□ 1.67
HOXA6-201ENST00000222728 DBF4Q9UBU7 674 aaPredicted RBP25.49■■□□□ 1.67
HOXA6-201ENST00000222728 TTLL7Q6ZT98 887 aa25.48■■□□□ 1.67
HOXA6-201ENST00000222728 NARFQ9UHQ1 456 aa25.48■■□□□ 1.67
HOXA6-201ENST00000222728 ARFGEF2Q9Y6D5 1785 aa25.47■■□□□ 1.67
HOXA6-201ENST00000222728 GYS1P13807 737 aa25.47■■□□□ 1.67
HOXA6-201ENST00000222728 AIMP1Q12904 312 aaKnown RBP25.47■■□□□ 1.67
HOXA6-201ENST00000222728 SLC16A10Q8TF71 515 aa25.47■■□□□ 1.67
HOXA6-201ENST00000222728 MTFR1LQ9H019 292 aa25.47■■□□□ 1.67
HOXA6-201ENST00000222728 XAGE3Q8WTP9 111 aa25.46■■□□□ 1.67
HOXA6-201ENST00000222728 ANKRD36CQ5JPF3 1778 aa25.46■■□□□ 1.67
HOXA6-201ENST00000222728 AFDNP55196 1824 aaKnown RBP25.45■■□□□ 1.66
HOXA6-201ENST00000222728 CAMTA2O94983 1202 aa25.45■■□□□ 1.66
HOXA6-201ENST00000222728 COPS6Q7L5N1 327 aa25.45■■□□□ 1.66
HOXA6-201ENST00000222728 STK31Q9BXU1 1019 aa25.45■■□□□ 1.66
HOXA6-201ENST00000222728 PHAXQ9H814 394 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms