RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
UBR5-201ENST00000220959 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
UBR5-201ENST00000220959 DDX23Q9BUQ8 820 aaKnown RBP17.2■□□□□ 0.34
UBR5-201ENST00000220959 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
UBR5-201ENST00000220959 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
UBR5-201ENST00000220959 CCDC82Q8N4S0 544 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 MYD88Q99836 296 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
UBR5-201ENST00000220959 PDCL2Q8N4E4 241 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 LMAN1P49257 510 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 STXBP4Q6ZWJ1 553 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 NAA15Q9BXJ9 866 aaKnown RBP17.2■□□□□ 0.34
UBR5-201ENST00000220959 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 GUCY1B3Q02153 619 aa17.2■□□□□ 0.34
UBR5-201ENST00000220959 TMCO5BA8MYB1 307 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 AMPD3Q01432 767 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 RNF41Q9H4P4 317 aaPredicted RBP17.19■□□□□ 0.34
UBR5-201ENST00000220959 CIZ1Q9ULV3 898 aaPredicted RBP17.19■□□□□ 0.34
UBR5-201ENST00000220959 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
UBR5-201ENST00000220959 SYCP3Q8IZU3 236 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 KIF18AQ8NI77 898 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 FSD2A1L4K1 749 aa17.19■□□□□ 0.34
UBR5-201ENST00000220959 CA8P35219 290 aa17.18■□□□□ 0.34
UBR5-201ENST00000220959 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
UBR5-201ENST00000220959 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
UBR5-201ENST00000220959 PUF60Q9UHX1 559 aaKnown RBP17.18■□□□□ 0.34
UBR5-201ENST00000220959 PRC1O43663 620 aa17.18■□□□□ 0.34
UBR5-201ENST00000220959 IFIT3O14879 490 aaKnown RBP17.18■□□□□ 0.34
UBR5-201ENST00000220959 EXOC6BQ9Y2D4 811 aa17.18■□□□□ 0.34
UBR5-201ENST00000220959 HLTFQ14527 1009 aaKnown RBP eCLIP17.18■□□□□ 0.341e-7■■□□□ 14.2
UBR5-201ENST00000220959 MICALCLQ6ZW33 695 aa17.18■□□□□ 0.34
UBR5-201ENST00000220959 TCERG1LQ5VWI1 586 aa17.18■□□□□ 0.34
UBR5-201ENST00000220959 YEATS4O95619 227 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 TRMT1LQ7Z2T5 733 aaKnown RBP17.17■□□□□ 0.34
UBR5-201ENST00000220959 CCDC175P0C221 793 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
UBR5-201ENST00000220959 SAMM50Q9Y512 469 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 LRRC45Q96CN5 670 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 NOP2P46087 812 aaKnown RBP17.17■□□□□ 0.34
UBR5-201ENST00000220959 WDR70Q9NW82 654 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 PRPF4BQ13523 1007 aaKnown RBP17.17■□□□□ 0.34
UBR5-201ENST00000220959 TCP11L1Q9NUJ3 509 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 SLC52A1Q9NWF4 448 aa17.17■□□□□ 0.34
UBR5-201ENST00000220959 SYCE3A1L190 88 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 FERMT3Q86UX7 667 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
UBR5-201ENST00000220959 CCDC12Q8WUD4 166 aaPredicted RBP17.16■□□□□ 0.34
UBR5-201ENST00000220959 RNF187Q5TA31 235 aaPredicted RBP17.16■□□□□ 0.34
UBR5-201ENST00000220959 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 C6orf229H3BNL8 230 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 CTAGE5O15320 804 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
UBR5-201ENST00000220959 FCHSD2O94868 740 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 CABP5Q9NP86 173 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 TRMT112Q9UI30 125 aaKnown RBP17.15■□□□□ 0.34
UBR5-201ENST00000220959 ACTN2P35609 894 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 MAP3K9P80192 1104 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
UBR5-201ENST00000220959 CCDC183Q5T5S1 534 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 PRPF40BQ6NWY9 871 aaKnown RBP17.15■□□□□ 0.34
UBR5-201ENST00000220959 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 SCAND2PQ9GZW5 306 aaPredicted RBP17.15■□□□□ 0.34
UBR5-201ENST00000220959 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 CPLX3Q8WVH0 158 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 ALS2CR12Q96Q35 445 aa17.15■□□□□ 0.34
UBR5-201ENST00000220959 KAT6BQ8WYB5 2073 aa17.14■□□□□ 0.34
UBR5-201ENST00000220959 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
UBR5-201ENST00000220959 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
UBR5-201ENST00000220959 GOLGA8BA8MQT2 603 aa17.14■□□□□ 0.33
UBR5-201ENST00000220959 MCM4P33991 863 aa17.14■□□□□ 0.33
UBR5-201ENST00000220959 ZNF354CQ86Y25 554 aa17.14■□□□□ 0.33
UBR5-201ENST00000220959 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
UBR5-201ENST00000220959 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
UBR5-201ENST00000220959 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 TTC16Q8NEE8 873 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 PPP1R14CQ8TAE6 165 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 IKBKGQ9Y6K9 419 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 SH2B1Q9NRF2 756 aaPredicted RBP17.13■□□□□ 0.33
UBR5-201ENST00000220959 STX6O43752 255 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 KIF5BP33176 963 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 BICD1Q96G01 975 aa17.13■□□□□ 0.33
UBR5-201ENST00000220959 SPATA24Q86W54 205 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 SREK1Q8WXA9 508 aaKnown RBP17.12■□□□□ 0.33
UBR5-201ENST00000220959 FAM114A1Q8IWE2 563 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 MX1P20591 662 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 UTP14AQ9BVJ6 771 aaKnown RBP17.12■□□□□ 0.33
UBR5-201ENST00000220959 ATAD2Q6PL18 1390 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 C6orf163Q5TEZ5 329 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 TMEM57Q8N5G2 664 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 MYO1BO43795 1136 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
UBR5-201ENST00000220959 BAG3O95817 575 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms