RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 UBTFL1P0CB47 393 aaPredicted RBP20.98■□□□□ 0.95
USB1-201ENST00000219281 NBPF6Q5VWK0 638 aa20.98■□□□□ 0.95
USB1-201ENST00000219281 NBPF4Q96M43 638 aa20.98■□□□□ 0.95
USB1-201ENST00000219281 UPF3BQ9BZI7 483 aaKnown RBP20.98■□□□□ 0.95
USB1-201ENST00000219281 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
USB1-201ENST00000219281 INTS4Q96HW7 963 aaKnown RBP20.97■□□□□ 0.95
USB1-201ENST00000219281 FAM208AQ9UK61 1670 aaKnown RBP20.97■□□□□ 0.95
USB1-201ENST00000219281 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
USB1-201ENST00000219281 KCNH5Q8NCM2 988 aa20.97■□□□□ 0.95
USB1-201ENST00000219281 IL25Q9H293 177 aa20.97■□□□□ 0.95
USB1-201ENST00000219281 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
USB1-201ENST00000219281 TUBGCP6Q96RT7 1819 aa20.96■□□□□ 0.95
USB1-201ENST00000219281 PDLIM2Q96JY6 352 aa20.96■□□□□ 0.95
USB1-201ENST00000219281 PHAXQ9H814 394 aaKnown RBP20.96■□□□□ 0.95
USB1-201ENST00000219281 LRRC37A3O60309 1634 aa20.96■□□□□ 0.95
USB1-201ENST00000219281 MBD3O95983 291 aa20.95■□□□□ 0.95
USB1-201ENST00000219281 GCP02774 474 aa20.95■□□□□ 0.95
USB1-201ENST00000219281 LTN1O94822 1766 aa20.95■□□□□ 0.94
USB1-201ENST00000219281 MAP4K4O95819 1239 aaPredicted RBP20.95■□□□□ 0.94
USB1-201ENST00000219281 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
USB1-201ENST00000219281 HS1BP3Q53T59 392 aa20.94■□□□□ 0.94
USB1-201ENST00000219281 SSH3Q8TE77 659 aa20.94■□□□□ 0.94
USB1-201ENST00000219281 AOX1Q06278 1338 aa20.94■□□□□ 0.94
USB1-201ENST00000219281 SOS1Q07889 1333 aaPredicted RBP20.94■□□□□ 0.94
USB1-201ENST00000219281 C19orf44Q9H6X5 657 aa20.94■□□□□ 0.94
USB1-201ENST00000219281 ZBTB7CA1YPR0 619 aa20.93■□□□□ 0.94
USB1-201ENST00000219281 SURF6O75683 361 aaKnown RBP20.93■□□□□ 0.94
USB1-201ENST00000219281 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
USB1-201ENST00000219281 KIAA1211Q6ZU35 1233 aa20.93■□□□□ 0.94
USB1-201ENST00000219281 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
USB1-201ENST00000219281 IL17RAQ96F46 866 aa20.93■□□□□ 0.94
USB1-201ENST00000219281 HSP90AA2PQ14568 343 aaPredicted RBP20.93■□□□□ 0.94
USB1-201ENST00000219281 FOXD4L6Q3SYB3 417 aaPredicted RBP20.93■□□□□ 0.94
USB1-201ENST00000219281 FOXD4L3Q6VB84 417 aaPredicted RBP20.93■□□□□ 0.94
USB1-201ENST00000219281 ARHGEF25Q86VW2 580 aa20.93■□□□□ 0.94
USB1-201ENST00000219281 OFD1O75665 1012 aa20.92■□□□□ 0.94
USB1-201ENST00000219281 BABAM1Q9NWV8 329 aa20.92■□□□□ 0.94
USB1-201ENST00000219281 RAB11FIP3O75154 756 aa20.92■□□□□ 0.94
USB1-201ENST00000219281 TPM2P07951 284 aa20.92■□□□□ 0.94
USB1-201ENST00000219281 HSPA4P34932 840 aa20.92■□□□□ 0.94
USB1-201ENST00000219281 KRT28Q7Z3Y7 464 aa20.92■□□□□ 0.94
USB1-201ENST00000219281 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
USB1-201ENST00000219281 NOL7Q9UMY1 257 aaKnown RBP20.92■□□□□ 0.94
USB1-201ENST00000219281 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
USB1-201ENST00000219281 C1orf167Q5SNV9 1468 aa20.91■□□□□ 0.94
USB1-201ENST00000219281 EIF2S2P20042 333 aaKnown RBP20.9■□□□□ 0.94
USB1-201ENST00000219281 LMOD2Q6P5Q4 547 aa20.9■□□□□ 0.94
USB1-201ENST00000219281 RHPN1Q8TCX5 695 aa20.9■□□□□ 0.94
USB1-201ENST00000219281 RRP9O43818 475 aaKnown RBP20.9■□□□□ 0.94
USB1-201ENST00000219281 POLA2Q14181 598 aa20.9■□□□□ 0.94
USB1-201ENST00000219281 RNF214Q8ND24 703 aa20.9■□□□□ 0.94
USB1-201ENST00000219281 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.9■□□□□ 0.94
USB1-201ENST00000219281 PI4K2BQ8TCG2 481 aa20.89■□□□□ 0.94
USB1-201ENST00000219281 GDPD2Q9HCC8 539 aa20.89■□□□□ 0.94
USB1-201ENST00000219281 SRGAP3O43295 1099 aa20.88■□□□□ 0.93
USB1-201ENST00000219281 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.88■□□□□ 0.93
USB1-201ENST00000219281 EPB41L2O43491 1005 aaKnown RBP20.88■□□□□ 0.93
USB1-201ENST00000219281 GADD45BO75293 160 aaPredicted RBP20.88■□□□□ 0.93
USB1-201ENST00000219281 AXIN2Q9Y2T1 843 aa20.88■□□□□ 0.93
USB1-201ENST00000219281 NBPF7P0C2Y1 421 aaPredicted RBP20.87■□□□□ 0.93
USB1-201ENST00000219281 LGR6Q9HBX8 967 aa20.87■□□□□ 0.93
USB1-201ENST00000219281 SGSM2O43147 1006 aa20.87■□□□□ 0.93
USB1-201ENST00000219281 SLIT3O75094 1523 aa20.87■□□□□ 0.93
USB1-201ENST00000219281 USP48Q86UV5 1035 aa20.87■□□□□ 0.93
USB1-201ENST00000219281 KIF1BPQ96EK5 621 aa20.87■□□□□ 0.93
USB1-201ENST00000219281 WDR33Q9C0J8 1336 aaKnown RBP20.87■□□□□ 0.93
USB1-201ENST00000219281 TSPY26PQ9H489 355 aa20.87■□□□□ 0.93
USB1-201ENST00000219281 CEMIPQ8WUJ3 1361 aa20.86■□□□□ 0.93
USB1-201ENST00000219281 SYAP1Q96A49 352 aaPredicted RBP20.86■□□□□ 0.93
USB1-201ENST00000219281 SNX14Q9Y5W7 946 aa20.86■□□□□ 0.93
USB1-201ENST00000219281 PHRF1Q9P1Y6 1649 aaKnown RBP20.86■□□□□ 0.93
USB1-201ENST00000219281 RAD50Q92878 1312 aa20.85■□□□□ 0.93
USB1-201ENST00000219281 ZNF500O60304 480 aaPredicted RBP20.85■□□□□ 0.93
USB1-201ENST00000219281 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
USB1-201ENST00000219281 CNTROBQ8N137 903 aa20.85■□□□□ 0.93
USB1-201ENST00000219281 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
USB1-201ENST00000219281 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
USB1-201ENST00000219281 CACNA1FO60840 1977 aa20.84■□□□□ 0.93
USB1-201ENST00000219281 EIF4A1P60842 406 aaKnown RBP20.84■□□□□ 0.93
USB1-201ENST00000219281 DDX17Q92841 729 aaKnown RBP20.84■□□□□ 0.93
USB1-201ENST00000219281 LSG1Q9H089 658 aaKnown RBP20.84■□□□□ 0.93
USB1-201ENST00000219281 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
USB1-201ENST00000219281 ZKSCAN5Q9Y2L8 839 aa20.84■□□□□ 0.93
USB1-201ENST00000219281 RGPD2P0DJD1 1756 aa20.84■□□□□ 0.93
USB1-201ENST00000219281 BEND3Q5T5X7 828 aa20.84■□□□□ 0.93
USB1-201ENST00000219281 LARP6Q9BRS8 491 aaKnown RBP20.84■□□□□ 0.93
USB1-201ENST00000219281 RPAP1Q9BWH6 1393 aaPredicted RBP20.83■□□□□ 0.93
USB1-201ENST00000219281 PI4KAP2A4QPH2 592 aa20.83■□□□□ 0.93
USB1-201ENST00000219281 RASEFQ8IZ41 740 aa20.83■□□□□ 0.93
USB1-201ENST00000219281 PI4KAP1Q8N8J0 262 aa20.83■□□□□ 0.93
USB1-201ENST00000219281 ANKRD24Q8TF21 1146 aa20.83■□□□□ 0.93
USB1-201ENST00000219281 DNAAF4Q8WXU2 420 aa20.83■□□□□ 0.93
USB1-201ENST00000219281 CCDC39Q9UFE4 941 aa20.83■□□□□ 0.93
USB1-201ENST00000219281 CWC27Q6UX04 472 aaKnown RBP20.83■□□□□ 0.92
USB1-201ENST00000219281 HSPA2P54652 639 aa20.82■□□□□ 0.92
USB1-201ENST00000219281 AK2P54819 239 aa20.82■□□□□ 0.92
USB1-201ENST00000219281 TTC14Q96N46 770 aa20.82■□□□□ 0.92
USB1-201ENST00000219281 R3HCC1Q9Y3T6 440 aaKnown RBP20.82■□□□□ 0.92
USB1-201ENST00000219281 MST1RQ04912 1400 aa20.82■□□□□ 0.92
USB1-201ENST00000219281 KCNQ3O43525 872 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms