RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 BRINP3Q76B58 766 aa10.33□□□□□ -0.76
EPB41L1-201ENST00000202028 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
EPB41L1-201ENST00000202028 IP6K1Q92551 441 aa10.33□□□□□ -0.76
EPB41L1-201ENST00000202028 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
EPB41L1-201ENST00000202028 KRT28Q7Z3Y7 464 aa10.33□□□□□ -0.76
EPB41L1-201ENST00000202028 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
EPB41L1-201ENST00000202028 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 RPAP2Q8IXW5 612 aaPredicted RBP10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 HOXC9P31274 260 aa10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 ARHGEF25Q86VW2 580 aa10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 IL1RAPL2Q9NP60 686 aa10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 ERC2O15083 957 aa10.32□□□□□ -0.76
EPB41L1-201ENST00000202028 DTNBO60941 627 aa10.31□□□□□ -0.76
EPB41L1-201ENST00000202028 ZNF853P0CG23 659 aa10.31□□□□□ -0.76
EPB41L1-201ENST00000202028 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
EPB41L1-201ENST00000202028 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
EPB41L1-201ENST00000202028 EIF2S2P20042 333 aaKnown RBP10.31□□□□□ -0.76
EPB41L1-201ENST00000202028 SLAIN2Q9P270 581 aa10.31□□□□□ -0.76
EPB41L1-201ENST00000202028 SYCE3A1L190 88 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 NLRP6P59044 892 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 GDPD2Q9HCC8 539 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 PAPPAQ13219 1627 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 MRC1P22897 1456 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 HTATSF1O43719 755 aaKnown RBP10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 MCCP23508 829 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 KLHL40Q2TBA0 621 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 GLIPR1L2Q4G1C9 344 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 DDIT3P35638 169 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 CCDC173Q0VFZ6 552 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 VSIG10Q8N0Z9 540 aa10.3□□□□□ -0.76
EPB41L1-201ENST00000202028 ZSCAN23Q3MJ62 389 aa10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 LRP6O75581 1613 aa10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 RBM10P98175 930 aaKnown RBP10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 OS9Q13438 667 aaPredicted RBP10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 ISY1Q9ULR0 285 aaKnown RBP10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 GNAI2P04899 355 aa10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 PRIM1P49642 420 aaKnown RBP10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 BRPF1P55201 1214 aaPredicted RBP10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 KIAA1211Q6ZU35 1233 aa10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 R3HCC1Q9Y3T6 440 aaKnown RBP10.29□□□□□ -0.76
EPB41L1-201ENST00000202028 AK9Q5TCS8 1911 aa10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 PDE1AP54750 535 aa10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 CICQ96RK0 1608 aaPredicted RBP10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 MTHFSDQ2M296 383 aaKnown RBP10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 DNTTIP2Q5QJE6 756 aaKnown RBP10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 GCP02774 474 aa10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 LRRCC1Q9C099 1032 aa10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 RBSNQ9H1K0 784 aa10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 BABAM1Q9NWV8 329 aa10.28□□□□□ -0.76
EPB41L1-201ENST00000202028 UBR2Q8IWV8 1755 aa10.27□□□□□ -0.76
EPB41L1-201ENST00000202028 CHL1O00533 1208 aa10.27□□□□□ -0.77
EPB41L1-201ENST00000202028 XPCQ01831 940 aaPredicted RBP10.27□□□□□ -0.77
EPB41L1-201ENST00000202028 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.77
EPB41L1-201ENST00000202028 TMX3Q96JJ7 454 aa10.27□□□□□ -0.77
EPB41L1-201ENST00000202028 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
EPB41L1-201ENST00000202028 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
EPB41L1-201ENST00000202028 SOS1Q07889 1333 aaPredicted RBP10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 SURF6O75683 361 aaKnown RBP10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 ZSCAN30Q86W11 494 aa10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 CWC22Q9HCG8 908 aaKnown RBP10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 LAMB4A4D0S4 1761 aa10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 CRB1P82279 1406 aa10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 MX1P20591 662 aa10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 UBE2Q2Q8WVN8 375 aa10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 COL5A2P05997 1499 aaPredicted RBP10.26□□□□□ -0.77
EPB41L1-201ENST00000202028 PNMA6EA0A0J9YXQ4 647 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 CCT4P50991 539 aaKnown RBP10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 PALD1Q9ULE6 856 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 NSFL1CQ9UNZ2 370 aaKnown RBP10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 FLIIQ13045 1269 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 UBTFL1P0CB47 393 aaPredicted RBP10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 RBM33Q96EV2 1170 aaKnown RBP10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 PTPRCP08575 1304 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 CEMIPQ8WUJ3 1361 aa10.25□□□□□ -0.77
EPB41L1-201ENST00000202028 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 KIAA0232Q92628 1395 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 ANXA1P04083 346 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 EYA1Q99502 592 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 ERBB3P21860 1342 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 CCDC30Q5VVM6 783 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.779e-7■■■□□ 15.7
EPB41L1-201ENST00000202028 TMEM63CQ9P1W3 806 aa10.24□□□□□ -0.77
EPB41L1-201ENST00000202028 GNAI3P08754 354 aa10.23□□□□□ -0.77
EPB41L1-201ENST00000202028 KCNJ4P48050 445 aa10.23□□□□□ -0.77
EPB41L1-201ENST00000202028 ESYT1Q9BSJ8 1104 aa10.23□□□□□ -0.77
EPB41L1-201ENST00000202028 ZNF831Q5JPB2 1677 aa10.23□□□□□ -0.77
EPB41L1-201ENST00000202028 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
EPB41L1-201ENST00000202028 UNC5CLQ8IV45 518 aa10.23□□□□□ -0.77
EPB41L1-201ENST00000202028 GLI3P10071 1580 aa10.22□□□□□ -0.77
EPB41L1-201ENST00000202028 ZDHHC9Q9Y397 364 aa10.22□□□□□ -0.77
EPB41L1-201ENST00000202028 PHAXQ9H814 394 aaKnown RBP10.22□□□□□ -0.77
EPB41L1-201ENST00000202028 FIBPO43427 364 aa10.21□□□□□ -0.77
EPB41L1-201ENST00000202028 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms