RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 STARD3NLO95772 234 aa37.24■■■■□ 3.55
PDCD2-201ENST00000167218 FKBP8Q14318 412 aa37.24■■■■□ 3.55
PDCD2-201ENST00000167218 YBX3P16989 372 aaKnown RBP eCLIP37.23■■■■□ 3.555e-10■■□□□ 11.9
PDCD2-201ENST00000167218 NFE2L2Q16236 605 aa37.23■■■■□ 3.55
PDCD2-201ENST00000167218 PELP1Q8IZL8 1130 aaKnown RBP37.23■■■■□ 3.55
PDCD2-201ENST00000167218 TEX13AQ9BXU3 409 aaPredicted RBP37.23■■■■□ 3.55
PDCD2-201ENST00000167218 PNNQ9H307 717 aaKnown RBP37.23■■■■□ 3.55
PDCD2-201ENST00000167218 COL15A1P39059 1388 aa37.22■■■■□ 3.55
PDCD2-201ENST00000167218 PRKRIP1Q9H875 184 aaPredicted RBP37.21■■■■□ 3.55
PDCD2-201ENST00000167218 CANXP27824 592 aaKnown RBP37.2■■■■□ 3.55
PDCD2-201ENST00000167218 EIF5P55010 431 aaKnown RBP37.19■■■■□ 3.54
PDCD2-201ENST00000167218 USPL1Q5W0Q7 1092 aa37.19■■■■□ 3.54
PDCD2-201ENST00000167218 NARFQ9UHQ1 456 aa37.19■■■■□ 3.54
PDCD2-201ENST00000167218 TAF7Q15545 349 aaPredicted RBP37.18■■■■□ 3.54
PDCD2-201ENST00000167218 PARP3Q9Y6F1 533 aa37.18■■■■□ 3.54
PDCD2-201ENST00000167218 C10orf71Q711Q0 1435 aa37.18■■■■□ 3.54
PDCD2-201ENST00000167218 KIAA1551Q9HCM1 1747 aa37.17■■■■□ 3.54
PDCD2-201ENST00000167218 ZPR1O75312 459 aa37.17■■■■□ 3.54
PDCD2-201ENST00000167218 MAPK8IP3Q9UPT6 1336 aa37.16■■■■□ 3.54
PDCD2-201ENST00000167218 TM4SF1P30408 202 aa37.16■■■■□ 3.54
PDCD2-201ENST00000167218 DDR1Q08345 913 aa37.16■■■■□ 3.54
PDCD2-201ENST00000167218 BCL2L12Q9HB09 334 aa37.15■■■■□ 3.54
PDCD2-201ENST00000167218 USP16Q9Y5T5 823 aa37.14■■■■□ 3.54
PDCD2-201ENST00000167218 PRAMEF22A3QJZ6 481 aa37.13■■■■□ 3.53
PDCD2-201ENST00000167218 A1BGP04217 495 aa37.13■■■■□ 3.53
PDCD2-201ENST00000167218 PXDNLA1KZ92 1463 aa37.13■■■■□ 3.53
PDCD2-201ENST00000167218 GRIN3BO60391 1043 aa37.12■■■■□ 3.53
PDCD2-201ENST00000167218 THUMPD2Q9BTF0 503 aaKnown RBP37.12■■■■□ 3.53
PDCD2-201ENST00000167218 MIS18AQ9NYP9 233 aa37.12■■■■□ 3.53
PDCD2-201ENST00000167218 N4BP2Q86UW6 1770 aaPredicted RBP37.1■■■■□ 3.53
PDCD2-201ENST00000167218 POLRMTO00411 1230 aaKnown RBP37.1■■■■□ 3.53
PDCD2-201ENST00000167218 SNRPA1P09661 255 aaKnown RBP37.1■■■■□ 3.53
PDCD2-201ENST00000167218 IL6STP40189 918 aaPredicted RBP37.1■■■■□ 3.53
PDCD2-201ENST00000167218 TGFB2P61812 414 aa37.1■■■■□ 3.53
PDCD2-201ENST00000167218 KDM3BQ7LBC6 1761 aa37.09■■■■□ 3.53
PDCD2-201ENST00000167218 A0A087WZG4 1122 aa37.07■■■■□ 3.52
PDCD2-201ENST00000167218 NFIXQ14938 502 aa37.07■■■■□ 3.52
PDCD2-201ENST00000167218 TMPOP42166 694 aaKnown RBP37.06■■■■□ 3.52
PDCD2-201ENST00000167218 PNISRQ8TF01 805 aaKnown RBP37.06■■■■□ 3.52
PDCD2-201ENST00000167218 WWC3Q9ULE0 1092 aa37.06■■■■□ 3.52
PDCD2-201ENST00000167218 AFDNP55196 1824 aaKnown RBP37.06■■■■□ 3.52
PDCD2-201ENST00000167218 RIPK4P57078 832 aa37.05■■■■□ 3.52
PDCD2-201ENST00000167218 A0A0G2JLW4 131 aa37.04■■■■□ 3.52
PDCD2-201ENST00000167218 ADAMTS8Q9UP79 889 aa37.03■■■■□ 3.52
PDCD2-201ENST00000167218 TBC1D2BQ9UPU7 963 aa37.03■■■■□ 3.52
PDCD2-201ENST00000167218 NRXN2Q9P2S2 1712 aa37.02■■■■□ 3.52
PDCD2-201ENST00000167218 CCDC146Q8IYE0 955 aa37.02■■■■□ 3.52
PDCD2-201ENST00000167218 ZNF330Q9Y3S2 320 aaPredicted RBP37.02■■■■□ 3.52
PDCD2-201ENST00000167218 BRCA1P38398 1863 aaKnown RBP37.02■■■■□ 3.52
PDCD2-201ENST00000167218 SCN7AQ01118 1682 aa37.02■■■■□ 3.52
PDCD2-201ENST00000167218 DPEP1P16444 411 aa37.01■■■■□ 3.52
PDCD2-201ENST00000167218 PIP4K2AP48426 406 aaPredicted RBP37.01■■■■□ 3.52
PDCD2-201ENST00000167218 WDR43Q15061 677 aaKnown RBP eCLIP37.01■■■■□ 3.52
PDCD2-201ENST00000167218 KCNA3P22001 575 aa36.99■■■■□ 3.51
PDCD2-201ENST00000167218 EIF4A1P60842 406 aaKnown RBP36.99■■■■□ 3.51
PDCD2-201ENST00000167218 ZNF784Q8NCA9 323 aaPredicted RBP36.99■■■■□ 3.51
PDCD2-201ENST00000167218 ZNF316A6NFI3 1004 aaPredicted RBP36.98■■■■□ 3.51
PDCD2-201ENST00000167218 NBPF26B4DH59 902 aa36.98■■■■□ 3.51
PDCD2-201ENST00000167218 NBPF10Q6P3W6 841 aaKnown RBP36.98■■■■□ 3.51
PDCD2-201ENST00000167218 NBPF15Q8N660 670 aa36.98■■■■□ 3.51
PDCD2-201ENST00000167218 RUNDC1Q96C34 613 aa36.98■■■■□ 3.51
PDCD2-201ENST00000167218 LAMB4A4D0S4 1761 aa36.97■■■■□ 3.51
PDCD2-201ENST00000167218 CAMTA2O94983 1202 aa36.97■■■■□ 3.51
PDCD2-201ENST00000167218 RRP7AQ9Y3A4 280 aaKnown RBP36.97■■■■□ 3.51
PDCD2-201ENST00000167218 GIGYF1O75420 1035 aaPredicted RBP36.96■■■■□ 3.51
PDCD2-201ENST00000167218 SERPINB2P05120 415 aa36.96■■■■□ 3.51
PDCD2-201ENST00000167218 TBC1D9BQ66K14 1250 aa36.96■■■■□ 3.51
PDCD2-201ENST00000167218 BCORQ6W2J9 1755 aa36.95■■■■□ 3.51
PDCD2-201ENST00000167218 DZIP3Q86Y13 1208 aaKnown RBP36.94■■■■□ 3.5
PDCD2-201ENST00000167218 LMOD3Q0VAK6 560 aa36.93■■■■□ 3.5
PDCD2-201ENST00000167218 BICDL1Q6ZP65 573 aa36.93■■■■□ 3.5
PDCD2-201ENST00000167218 NPM2Q86SE8 214 aaKnown RBP36.92■■■■□ 3.5
PDCD2-201ENST00000167218 TRIM35Q9UPQ4 493 aa36.91■■■■□ 3.5
PDCD2-201ENST00000167218 NEUROD2Q15784 382 aa36.9■■■■□ 3.5
PDCD2-201ENST00000167218 TSPYL4Q9UJ04 414 aa36.9■■■■□ 3.5
PDCD2-201ENST00000167218 BCS1LQ9Y276 419 aa36.9■■■■□ 3.5
PDCD2-201ENST00000167218 CHRNA5P30532 468 aa36.89■■■■□ 3.5
PDCD2-201ENST00000167218 BABAM1Q9NWV8 329 aa36.89■■■■□ 3.5
PDCD2-201ENST00000167218 PIM2Q9P1W9 311 aa36.87■■■■□ 3.49
PDCD2-201ENST00000167218 ARFGEF1Q9Y6D6 1849 aa36.86■■■■□ 3.49
PDCD2-201ENST00000167218 CARMIL3Q8ND23 1372 aa36.86■■■■□ 3.49
PDCD2-201ENST00000167218 CCDC184Q52MB2 194 aa36.85■■■■□ 3.49
PDCD2-201ENST00000167218 CLEC4GQ6UXB4 293 aa36.84■■■■□ 3.49
PDCD2-201ENST00000167218 ANKRD31Q8N7Z5 1873 aa36.82■■■■□ 3.49
PDCD2-201ENST00000167218 SETDB2Q96T68 719 aa36.82■■■■□ 3.48
PDCD2-201ENST00000167218 RGL2O15211 777 aa36.81■■■■□ 3.48
PDCD2-201ENST00000167218 PRR5LQ6MZQ0 368 aa36.81■■■■□ 3.48
PDCD2-201ENST00000167218 CHL1O00533 1208 aa36.8■■■■□ 3.48
PDCD2-201ENST00000167218 DLEC1Q9Y238 1755 aa36.8■■■■□ 3.48
PDCD2-201ENST00000167218 ADCY9O60503 1353 aa36.79■■■■□ 3.48
PDCD2-201ENST00000167218 DALRD3Q5D0E6 543 aaKnown RBP36.79■■■■□ 3.48
PDCD2-201ENST00000167218 ZNF652Q9Y2D9 606 aa36.77■■■■□ 3.48
PDCD2-201ENST00000167218 APAF1O14727 1248 aa36.76■■■■□ 3.48
PDCD2-201ENST00000167218 HLFQ16534 295 aa36.76■■■■□ 3.48
PDCD2-201ENST00000167218 CCDC24Q8N4L8 307 aa36.76■■■■□ 3.48
PDCD2-201ENST00000167218 BRIP1Q9BX63 1249 aa36.75■■■■□ 3.47
PDCD2-201ENST00000167218 ERBB4Q15303 1308 aa36.75■■■■□ 3.47
PDCD2-201ENST00000167218 ARHGAP27Q6ZUM4 889 aa36.74■■■■□ 3.47
PDCD2-201ENST00000167218 C2CD5Q86YS7 1000 aa36.74■■■■□ 3.47
PDCD2-201ENST00000167218 NGEFQ8N5V2 710 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms