RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ISY1Q9ULR0 285 aaKnown RBP14.58□□□□□ -0.07
CHPF2-201ENST00000035307 DEPDC5O75140 1603 aa14.58□□□□□ -0.07
CHPF2-201ENST00000035307 TMEM131LA2VDJ0 1609 aa14.58□□□□□ -0.08
CHPF2-201ENST00000035307 SNRPA1P09661 255 aaKnown RBP14.58□□□□□ -0.08
CHPF2-201ENST00000035307 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
CHPF2-201ENST00000035307 ZBTB40Q9NUA8 1239 aa14.58□□□□□ -0.08
CHPF2-201ENST00000035307 CWC27Q6UX04 472 aaKnown RBP14.58□□□□□ -0.08
CHPF2-201ENST00000035307 PPP1R1BQ9UD71 204 aaPredicted RBP14.58□□□□□ -0.08
CHPF2-201ENST00000035307 RNF123Q5XPI4 1314 aa14.57□□□□□ -0.08
CHPF2-201ENST00000035307 APPP05067 770 aa14.57□□□□□ -0.08
CHPF2-201ENST00000035307 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
CHPF2-201ENST00000035307 SNRKQ9NRH2 765 aa14.57□□□□□ -0.08
CHPF2-201ENST00000035307 ATP7BP35670 1465 aa14.57□□□□□ -0.08
CHPF2-201ENST00000035307 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
CHPF2-201ENST00000035307 FSD1Q9BTV5 496 aa14.57□□□□□ -0.08
CHPF2-201ENST00000035307 ZBTB7BO15156 539 aaPredicted RBP14.56□□□□□ -0.08
CHPF2-201ENST00000035307 FIBPO43427 364 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 CNNM1Q9NRU3 951 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 HDAC5Q9UQL6 1122 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 ADGRL3Q9HAR2 1447 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 STARD3NLO95772 234 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
CHPF2-201ENST00000035307 FKBP4Q02790 459 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHPF2-201ENST00000035307 INSRP06213 1382 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 ERBB3P21860 1342 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 IGSF1Q8N6C5 1336 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 STK3Q13188 491 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 DNAJC10Q8IXB1 793 aa14.56□□□□□ -0.08
CHPF2-201ENST00000035307 SSFA2P28290 1259 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 WASHC4Q2M389 1173 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 SMIM5Q71RC9 77 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 TRMT2AQ8IZ69 625 aaKnown RBP14.55□□□□□ -0.08
CHPF2-201ENST00000035307 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
CHPF2-201ENST00000035307 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 H3BQV1 296 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 RPAP2Q8IXW5 612 aaPredicted RBP14.55□□□□□ -0.08
CHPF2-201ENST00000035307 ASAP1Q9ULH1 1129 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 PNMA6EA0A0J9YXQ4 647 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
CHPF2-201ENST00000035307 TBC1D32Q96NH3 1257 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 NDUFB9Q9Y6M9 179 aa14.55□□□□□ -0.08
CHPF2-201ENST00000035307 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
CHPF2-201ENST00000035307 ERC2O15083 957 aa14.54□□□□□ -0.08
CHPF2-201ENST00000035307 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
CHPF2-201ENST00000035307 FAM184AQ8NB25 1140 aa14.54□□□□□ -0.08
CHPF2-201ENST00000035307 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
CHPF2-201ENST00000035307 PPFIA3O75145 1194 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 DCAF5Q96JK2 942 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 IQSEC3Q9UPP2 1182 aaPredicted RBP14.53□□□□□ -0.08
CHPF2-201ENST00000035307 NUCB2P80303 420 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 CEBPZQ03701 1054 aaKnown RBP14.53□□□□□ -0.08
CHPF2-201ENST00000035307 KIAA2012Q0VF49 1180 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 VPS37DQ86XT2 251 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 HYPKQ9NX55 129 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 NRXN1Q9ULB1 1477 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 PHKG2P15735 406 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 HELBQ8NG08 1087 aaPredicted RBP14.53□□□□□ -0.08
CHPF2-201ENST00000035307 FAM89AQ96GI7 184 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 GDPD2Q9HCC8 539 aa14.53□□□□□ -0.08
CHPF2-201ENST00000035307 NASPP49321 788 aaPredicted RBP14.52□□□□□ -0.08
CHPF2-201ENST00000035307 RABEP1Q15276 862 aa14.52□□□□□ -0.08
CHPF2-201ENST00000035307 SLC52A2Q9HAB3 445 aa14.52□□□□□ -0.08
CHPF2-201ENST00000035307 CYP27B1O15528 508 aa14.52□□□□□ -0.09
CHPF2-201ENST00000035307 SKOR2Q2VWA4 1001 aaPredicted RBP14.52□□□□□ -0.09
CHPF2-201ENST00000035307 CEP85Q6P2H3 762 aa14.52□□□□□ -0.09
CHPF2-201ENST00000035307 LMBR1LQ6UX01 489 aa14.52□□□□□ -0.09
CHPF2-201ENST00000035307 RUFY2Q8WXA3 655 aa14.52□□□□□ -0.09
CHPF2-201ENST00000035307 CPSF1Q10570 1443 aaKnown RBP14.52□□□□□ -0.09
CHPF2-201ENST00000035307 KDM2BQ8NHM5 1336 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 AATKQ6ZMQ8 1374 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 TTLL7Q6ZT98 887 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 SPATA31D1Q6ZQQ2 1576 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 PTPRCP08575 1304 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 PPLO60437 1756 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
CHPF2-201ENST00000035307 PTMSP20962 102 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 SF3A1Q15459 793 aaKnown RBP14.5□□□□□ -0.09
CHPF2-201ENST00000035307 CREBRFQ8IUR6 639 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 IQGAP1P46940 1657 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 MX1P20591 662 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 SPATA31A3Q5VYP0 1347 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 SETBP1Q9Y6X0 1596 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 G3V3G9 751 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 GIGYF1O75420 1035 aaPredicted RBP14.5□□□□□ -0.09
CHPF2-201ENST00000035307 DCAF8Q5TAQ9 597 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 KSR2Q6VAB6 950 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 FERMT3Q86UX7 667 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 CNTROBQ8N137 903 aa14.5□□□□□ -0.09
CHPF2-201ENST00000035307 TNPO1Q92973 898 aaKnown RBP14.49□□□□□ -0.09
CHPF2-201ENST00000035307 ZNF594Q96JF6 807 aaPredicted RBP14.49□□□□□ -0.09
CHPF2-201ENST00000035307 BICD2Q8TD16 824 aa14.49□□□□□ -0.09
CHPF2-201ENST00000035307 MYO3AQ8NEV4 1616 aa14.49□□□□□ -0.09
CHPF2-201ENST00000035307 PANK2Q9BZ23 570 aa14.49□□□□□ -0.09
CHPF2-201ENST00000035307 GRM8O00222 908 aa14.48□□□□□ -0.09
CHPF2-201ENST00000035307 ANKRD44Q8N8A2 993 aa14.48□□□□□ -0.09
CHPF2-201ENST00000035307 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
CHPF2-201ENST00000035307 MRE11P49959 708 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms