RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 HSPA4P34932 840 aa12.66□□□□□ -0.38
CX3CL1-201ENST00000006053 CPA1P15085 419 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 SMAP1Q8IYB5 467 aaPredicted RBP12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 IPO4Q8TEX9 1081 aaKnown RBP12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 JARID2Q92833 1246 aaPredicted RBP12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 USP44Q9H0E7 712 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 ADCY5O95622 1261 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 CCDC183Q5T5S1 534 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 ROBO2Q9HCK4 1378 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 MON2Q7Z3U7 1717 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
CX3CL1-201ENST00000006053 C3P01024 1663 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 AK2P54819 239 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 TSC1Q92574 1164 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 FAM184AQ8NB25 1140 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 STX6O43752 255 aa12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 EIF2S2P20042 333 aaKnown RBP12.64□□□□□ -0.39
CX3CL1-201ENST00000006053 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 SETD1AO15047 1707 aaKnown RBP12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 SYT1P21579 422 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 RHPN1Q8TCX5 695 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 ARHGEF10O15013 1369 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 SRGAP3O43295 1099 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 NUTM2GQ5VZR2 741 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
CX3CL1-201ENST00000006053 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 SGSM2O43147 1006 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 UVSSAQ2YD98 709 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 SIRT1Q96EB6 747 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 RAD50Q92878 1312 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 PLEKHG3A1L390 1219 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 OS9Q13438 667 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 USP6P35125 1406 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 UBE2HP62256 183 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 CNTROBQ8N137 903 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 RIMS1Q86UR5 1692 aaKnown RBP12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 TCHHQ07283 1943 aa12.62□□□□□ -0.39
CX3CL1-201ENST00000006053 FAM177BA6PVY3 158 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 F13A1P00488 732 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 PI4K2BQ8TCG2 481 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 FLT4P35916 1363 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 NRXN3Q9Y4C0 1643 aa12.61□□□□□ -0.39
CX3CL1-201ENST00000006053 LARGE1O95461 756 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 LSG1Q9H089 658 aaKnown RBP12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 CHMP3Q9Y3E7 222 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 AKAP12Q02952 1782 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 AOX1Q06278 1338 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 MYRIPQ8NFW9 859 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 KIF1BPQ96EK5 621 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 TTC14Q96N46 770 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 GJB2P29033 226 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 DIAPH3Q9NSV4 1193 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
CX3CL1-201ENST00000006053 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 NLRP6P59044 892 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 SBNO1A3KN83 1393 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 SPATA31D1Q6ZQQ2 1576 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
CX3CL1-201ENST00000006053 KDM4AO75164 1064 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms