RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Ica1lQ3TY65 431 aa11.08□□□□□ -0.64
Usp28-203ENSMUST00000213874 Fam50bQ9WTJ8 334 aa11.08□□□□□ -0.64
Usp28-203ENSMUST00000213874 Hs1bp3Q3TC93 395 aa11.08□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ncbp1Q3UYV9 790 aaKnown RBP11.08□□□□□ -0.64
Usp28-203ENSMUST00000213874 Slc39a6Q8C145 765 aa11.08□□□□□ -0.64
Usp28-203ENSMUST00000213874 Nup88Q8CEC0 753 aaKnown RBP11.08□□□□□ -0.64
Usp28-203ENSMUST00000213874 Zbtb38Q3LR78 1197 aa11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Hand2Q61039 217 aa11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ptcd1Q8C2E4 695 aaKnown RBP11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 RdxP26043 583 aaKnown RBP11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Aldh8a1Q8BH00 487 aa11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ncbp3Q8BZR9 615 aaKnown RBP11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 TatQ8QZR1 454 aa11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Prrc2bQ7TPM1 1486 aaKnown RBP11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Arhgef1Q61210 920 aaKnown RBP11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Cchcr1Q8K2I2 770 aa11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Nol7Q9D7Z3 254 aaKnown RBP11.07□□□□□ -0.64
Usp28-203ENSMUST00000213874 Cnnm1Q0GA42 951 aa11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ddx46Q569Z5 1032 aaKnown RBP11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Mdm2P23804 489 aa11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Pwp2Q8BU03 919 aaKnown RBP11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Bach2P97303 839 aa11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Taf3Q5HZG4 932 aa11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Dhx38Q80X98 1228 aa11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Arid5bQ8BM75 1188 aaKnown RBP11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 Iqgap1Q9JKF1 1657 aaKnown RBP11.06□□□□□ -0.64
Usp28-203ENSMUST00000213874 PalldQ9ET54 1408 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Gm973E9Q295 1059 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Map3k2Q61083 619 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Btbd11Q6GQW0 1109 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Hook1Q8BIL5 728 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Tbc1d7Q9D0K0 293 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Chrm1P12657 460 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Cd22P35329 862 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Q3UJC8 639 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 LlphQ9D945 130 aaKnown RBP11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Card6E9PWH2 1175 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Dync1i1O88485 628 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Pkp1P97350 728 aaKnown RBP11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Hvcn1Q3U2S8 269 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ubash3aQ3V3E1 624 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ddx11Q6AXC6 880 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Lmbrd2Q8C561 694 aa11.05□□□□□ -0.64
Usp28-203ENSMUST00000213874 Nfatc2ipO09130 412 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Dnajc2P54103 621 aaKnown RBP11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Pik3r4Q8VD65 1358 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Myom2Q14BI5 1463 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Gm10563F6WIE4 79 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Lnx1O70263 728 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Syt1P46096 421 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Tgfb1i1Q62219 461 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Fez2Q6TYB5 348 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Mrpl50Q8VDT9 159 aaKnown RBP11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 HypkQ9CR41 129 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Rufy3Q9D394 469 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 4930548H24RikQ9D496 437 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Usp25P57080 1055 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Igsf3Q6ZQA6 1194 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Ift57Q8BXG3 429 aa11.04□□□□□ -0.64
Usp28-203ENSMUST00000213874 Skap1Q3UUV5 355 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Unc5clQ6R653 518 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Tti2Q8BGV4 512 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Rrs1Q9CYH6 365 aaKnown RBP11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Adgrl3Q80TS3 1537 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Rbm8a2A0A0N4SUH6 174 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Mmp8O70138 465 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Atp8b2P98199 1209 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Rbm8aQ9CWZ3 174 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Irx5Q9JKQ4 484 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Nfe2l3Q9WTM4 660 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Kdm5aQ3UXZ9 1690 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Brpf3B2KF05 1204 aaKnown RBP11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Elmsan1E9Q2I4 1089 aaKnown RBP11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Atp1a3Q6PIC6 1013 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Slc35g1Q8BY79 368 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Gprasp1Q5U4C1 1347 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Lcmt1A0A0U1RNF2 332 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Dnajc25A2ALW5 357 aa11.03□□□□□ -0.64
Usp28-203ENSMUST00000213874 Vwa3bJ9JI28 736 aa11.02□□□□□ -0.64
Usp28-203ENSMUST00000213874 Tm6sf1P58749 370 aa11.02□□□□□ -0.64
Usp28-203ENSMUST00000213874 Zranb3Q6NZP1 1069 aa11.02□□□□□ -0.64
Usp28-203ENSMUST00000213874 Cyp2d12Q8BVD2 504 aa11.02□□□□□ -0.64
Usp28-203ENSMUST00000213874 Fyb1O35601 819 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Trim28Q62318 834 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Wdr24Q8CFJ9 790 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Adam1bQ8R534 806 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Rbm33Q9CXK9 1231 aaKnown RBP11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Irgm2A0A140LIF8 407 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Ier5O89113 308 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 L1td1Q587J6 782 aaKnown RBP11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Fsd1Q7TPM6 496 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Pus3Q9JI38 481 aa11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Rrbp1Q99PL5 1605 aaKnown RBP11.02□□□□□ -0.65
Usp28-203ENSMUST00000213874 Abcc1O35379 1528 aa11.01□□□□□ -0.65
Usp28-203ENSMUST00000213874 Chl1P70232 1209 aa11.01□□□□□ -0.65
Usp28-203ENSMUST00000213874 Anp32cQ64G17 123 aa11.01□□□□□ -0.65
Usp28-203ENSMUST00000213874 E4f1Q8CCE9 783 aa11.01□□□□□ -0.65
Usp28-203ENSMUST00000213874 SrrtQ99MR6 875 aaKnown RBP11.01□□□□□ -0.65
Usp28-203ENSMUST00000213874 Irx4Q9QY61 515 aa11.01□□□□□ -0.65
Usp28-203ENSMUST00000213874 Mcmdc2E9Q956 681 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms