RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Pdzd9Q9D9M4 266 aa12.24□□□□□ -0.45
Usp4-209ENSMUST00000194959 Slit3Q9WVB4 1523 aa12.24□□□□□ -0.45
Usp4-209ENSMUST00000194959 Ppp1r37Q8BKR5 712 aa12.24□□□□□ -0.45
Usp4-209ENSMUST00000194959 Q8C5K5 320 aa12.24□□□□□ -0.45
Usp4-209ENSMUST00000194959 Znf541Q0GGX2 1363 aa12.24□□□□□ -0.45
Usp4-209ENSMUST00000194959 Pmfbp1Q9WVQ0 1022 aa12.24□□□□□ -0.45
Usp4-209ENSMUST00000194959 Rassf8Q8CJ96 419 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 Znf692Q3U381 531 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 Ncapd2Q8K2Z4 1392 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 NmiO35309 314 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 FosbP13346 338 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 CrklP47941 303 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 GpkowQ56A08 488 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 Larp1Q6ZQ58 1072 aaKnown RBP12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 Kdm4cQ8VCD7 1054 aa12.23□□□□□ -0.45
Usp4-209ENSMUST00000194959 Camta1A2A891 1682 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 Cnksr1A2A9K7 700 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 CgnP59242 1191 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 EappQ5BU09 281 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 Unc5clQ6R653 518 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 Dhx38Q80X98 1228 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 TefQ9JLC6 301 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 AU015836B2RUM3 263 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 Zbtb3Q91X45 518 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 Sh3bp5Q9Z131 463 aa12.22□□□□□ -0.45
Usp4-209ENSMUST00000194959 Tns3Q5SSZ5 1440 aa12.21□□□□□ -0.45
Usp4-209ENSMUST00000194959 Ncoa4Q5U4H9 625 aa12.21□□□□□ -0.45
Usp4-209ENSMUST00000194959 Ano8Q6PB70 1060 aa12.21□□□□□ -0.45
Usp4-209ENSMUST00000194959 St18Q80TY4 1045 aa12.21□□□□□ -0.45
Usp4-209ENSMUST00000194959 Phf23Q8BSN5 401 aa12.21□□□□□ -0.45
Usp4-209ENSMUST00000194959 Tmem2Q5FWI3 1383 aa12.21□□□□□ -0.45
Usp4-209ENSMUST00000194959 Kif1aP33173 1695 aa12.21□□□□□ -0.46
Usp4-209ENSMUST00000194959 Syce3B5KM66 88 aa12.21□□□□□ -0.46
Usp4-209ENSMUST00000194959 Gjb2Q00977 226 aa12.21□□□□□ -0.46
Usp4-209ENSMUST00000194959 Pdlim2Q8R1G6 349 aa12.21□□□□□ -0.46
Usp4-209ENSMUST00000194959 Zbtb22Q9Z0G7 638 aa12.21□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ercc3P49135 783 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Zpr1Q62384 459 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Igsf1Q7TQA1 1317 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Grm8P47743 908 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Rbm27Q5SFM8 1060 aaKnown RBP12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Naa30Q8CES0 364 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Top1mtQ8R4U6 593 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Fam84aQ9D650 292 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Mad1l1Q9WTX8 717 aaKnown RBP12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Stk36Q69ZM6 1316 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Soga3Q6NZL0 945 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Slc5a1Q8C3K6 665 aa12.2□□□□□ -0.46
Usp4-209ENSMUST00000194959 Adam1aQ60813 791 aa12.19□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ltv1Q6NSQ7 470 aaKnown RBP12.19□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ddx54Q8K4L0 874 aaKnown RBP12.19□□□□□ -0.46
Usp4-209ENSMUST00000194959 Pdzrn3Q69ZS0 1063 aa12.19□□□□□ -0.46
Usp4-209ENSMUST00000194959 Smim5Q8BT42 78 aa12.19□□□□□ -0.46
Usp4-209ENSMUST00000194959 Taf7Q9R1C0 341 aa12.19□□□□□ -0.46
Usp4-209ENSMUST00000194959 Chd2E9PZM4 1827 aaKnown RBP12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Adora1Q60612 326 aa12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Mum1Q6DID5 682 aa12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Asic4Q7TNS7 539 aa12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Phkg2Q9DB30 406 aa12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Msh6P54276 1358 aaKnown RBP12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Cct4P80315 539 aaKnown RBP12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Paxip1Q6NZQ4 1056 aa12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Rrs1Q9CYH6 365 aaKnown RBP12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Elp1Q7TT37 1333 aaKnown RBP12.18□□□□□ -0.46
Usp4-209ENSMUST00000194959 Col1a2Q01149 1372 aa12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 Zdhhc9P59268 364 aa12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 AnlnQ8K298 1121 aaKnown RBP12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 Adcy9P51830 1353 aa12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 Pik3c2aQ61194 1686 aa12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ubr1O70481 1757 aa12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ttc19Q8CC21 365 aa12.17□□□□□ -0.46
Usp4-209ENSMUST00000194959 Map2P20357 1828 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Mdm2P23804 489 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Fkbp5Q64378 456 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 RgmbQ7TQ33 436 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Mrps27Q8BK72 415 aaKnown RBP12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 KinQ8K339 391 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Efcab2Q9CQ46 164 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Smc3Q9CW03 1217 aaKnown RBP12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 LlphQ9D945 130 aaKnown RBP12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ddx46Q569Z5 1032 aaKnown RBP12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Tsr2Q8C8T8 191 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Cdca7lQ922M5 438 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Aox2Q5SGK3 1345 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Pnpla7A2AJ88 1352 aa12.16□□□□□ -0.46
Usp4-209ENSMUST00000194959 Polr3dQ91WD1 398 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Adamtsl3G3UXC7 1706 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ythdc1E9Q5K9 736 aaKnown RBP12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Vps54Q5SPW0 977 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ddx11Q6AXC6 880 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Casc1Q6TDU8 730 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Tmx3Q8BXZ1 456 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 CrebrfQ8CDG5 640 aaKnown RBP12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Iffo2Q8R2V2 512 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Bag3Q9JLV1 577 aaKnown RBP12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Atp6v1dP57746 247 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Bms1Q6PGF5 1284 aaKnown RBP12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Ints3Q7TPD0 1041 aaKnown RBP12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Q9D9S1 216 aa12.15□□□□□ -0.46
Usp4-209ENSMUST00000194959 Timm10P62073 90 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms