RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Hoxb7P09024 217 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 SrrtQ99MR6 875 aaKnown RBP10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Gm32742A0A1B0GT42 1604 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Ttc37F8VPK0 1563 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 PtprmP28828 1452 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 PaskQ8CEE6 1383 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Kif2aP28740 705 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Flad1Q8R123 492 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 4930548H24RikQ9D496 437 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Tns3Q5SSZ5 1440 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 CrebrfQ8CDG5 640 aaKnown RBP10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Zkscan5Q9Z1D8 819 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Oas2E9Q9A9 742 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Zfp397Q7TNK4 527 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Rassf8Q8CJ96 419 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 NgdnQ9DB96 315 aaKnown RBP10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 MvpQ9EQK5 861 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Sh3bp5Q9Z131 463 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Mbd5B1AYB6 1498 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Nphp4P59240 1425 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Usp19Q3UJD6 1360 aa10.45□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Zkscan7E9PVW1 718 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Hoxc9P09633 260 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Map3k13Q1HKZ5 959 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Mns1Q61884 491 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Cyp46a1Q9WVK8 500 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Myom2Q14BI5 1463 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Cfap73J3QPZ5 306 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Brinp3Q499E0 766 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Spag5Q7TME2 1165 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Rsph6aQ8CDR2 708 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Lrrc59Q922Q8 307 aaKnown RBP10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Trim34aQ99PP6 485 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Cdc37l1Q9CZP7 335 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Hecw2Q6I6G8 1578 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Usp48Q3V0C5 1052 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Pm20d1Q8C165 503 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Exoc6bA6H5Z3 810 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 LifrP42703 1092 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Neurod6P48986 337 aa10.44□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Adgrb3Q80ZF8 1522 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 ThemisQ8BGW0 636 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Mapk8ip1Q9WVI9 707 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Pde4bB1AWC9 736 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 InhbeO08717 350 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 PnnO35691 725 aaKnown RBP10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 CenppQ9CZ92 286 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Cyp27a1Q9DBG1 533 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Pes1Q9EQ61 584 aaKnown RBP10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Kiaa1210E9Q0C6 1637 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 AdgbG3UZ78 1657 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Astn2Q80Z10 1352 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Paxbp1P58501 919 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Ankib1Q6ZPS6 1085 aa10.43□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Cep135Q6P5D4 1140 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Ttc19Q8CC21 365 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Stard3nlQ9DCI3 235 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Pmfbp1Q9WVQ0 1022 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Aldh1l1Q8R0Y6 902 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Bicd2Q921C5 820 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Tceal9Q9DD24 104 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Gm45015A0A140LII9 184 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Gm18336A0A140LIU8 765 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Card10P58660 1021 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Snx13Q6PHS6 957 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Ints3Q7TPD0 1041 aaKnown RBP10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Zmynd15Q8C0R7 736 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Zbtb22Q9Z0G7 638 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 RereQ80TZ9 1558 aa10.42□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Nup88Q8CEC0 753 aaKnown RBP10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Klhdc4Q921I2 584 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 MecomP14404 1042 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Hmox1P14901 289 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Sgsm1Q8BPQ7 1093 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Ccdc178Q8CDV0 866 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Ube2hP62257 183 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Q3UPC7 1272 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 TnmdQ9EP64 317 aa10.41□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Card6E9PWH2 1175 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Trim55G3X8Y1 545 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Pdia3P27773 505 aaKnown RBP10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Nucb1Q02819 459 aaKnown RBP10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 R3hcc1Q8BSI6 488 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Jakmip1Q8BVL9 626 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Knl1Q66JQ7 1612 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Kiaa0556Q8C753 1610 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Usp25P57080 1055 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Plekhm2Q80TQ5 1018 aa10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Smarca5Q91ZW3 1051 aaKnown RBP10.4□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Zkscan2G3X952 960 aa10.4□□□□□ -0.75
Col28a1-201ENSMUST00000115537 EvcP57680 1005 aa10.4□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Cfap157Q0VFX2 523 aa10.4□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Cul9Q80TT8 1865 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Nip7Q9CXK8 180 aaKnown RBP10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Sbno1Q689Z5 1390 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Smarcc1P97496 1104 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Cnnm3Q32NY4 713 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Chpf2Q3UU43 768 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 AnkarA2RT91 1465 aa10.39□□□□□ -0.75
Col28a1-201ENSMUST00000115537 Mctp1E9PV86 951 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 148.2 ms