RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Psen2Q61144 448 aa6.47□□□□□ -1.37
Hmgb1-203ENSMUST00000110505 Znf526Q8BI66 675 aa6.47□□□□□ -1.37
Hmgb1-203ENSMUST00000110505 Cyp2c70Q91W64 489 aa6.47□□□□□ -1.37
Hmgb1-203ENSMUST00000110505 Prr18Q6PAN7 307 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Gtpbp3Q923K4 492 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Bcl2l12Q9D3J3 255 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 AnkarA2RT91 1465 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Zfp644E9QA22 1323 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Arap3Q8R5G7 1538 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Ino80Q6ZPV2 1559 aa6.46□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 DgkhD3YXJ0 1156 aa6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Mdm2P23804 489 aa6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Map4k5Q8BPM2 847 aaKnown RBP6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Dnajc14Q921R4 703 aa6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Tmem94Q7TSH8 1360 aa6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Prrc2bQ7TPM1 1486 aaKnown RBP6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 PtprvP70289 1705 aa6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Efcab6Q6P1E8 1516 aa6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Rbm26Q6NZN0 1012 aaKnown RBP6.45□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 PalldQ9ET54 1408 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Atp7aQ64430 1491 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Map4P27546 1125 aaKnown RBP6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Tial1P70318 392 aaKnown RBP6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Gtf3c3Q3TMP1 882 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Tbc1d32Q3URV1 1296 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 4930567H17RikQ3V0K5 233 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Ddx17Q501J6 650 aaKnown RBP6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Atf3Q60765 181 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Ptcd1Q8C2E4 695 aaKnown RBP6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Znf687Q9D2D7 1237 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Bcl11aQ9QYE3 773 aa6.44□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Rasa1E9PYG6 1038 aa6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Dnmt3aO88508 908 aaKnown RBP6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Serinc5Q8BHJ6 461 aa6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Sumf1Q8R0F3 372 aa6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Atp1b4Q99ME6 356 aa6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Rnf25Q9QZR0 456 aa6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Sall3Q62255 1320 aa6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Ylpm1Q9R0I7 1386 aaKnown RBP6.43□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Armc3A2AU72 881 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Prss12O08762 761 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 SvopQ8BFT9 548 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Smim5Q8BT42 78 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Ybx3Q9JKB3 361 aaKnown RBP6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Rgs20Q9QZB1 239 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Nup155Q99P88 1391 aaKnown RBP6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Lmtk3Q5XJV6 1424 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Nwd1A6H603 1563 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Siglec1Q62230 1695 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Sh3bp2Q06649 559 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Znf280cQ6P3Y5 742 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Cap2Q9CYT6 476 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Fbxo3Q9DC63 480 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Ly6iQ9WU67 134 aa6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Fam50aQ9WV03 339 aaKnown RBP6.42□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Myom3A2ABU4 1439 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Slit3Q9WVB4 1523 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Uggt1Q6P5E4 1551 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Prdm2A2A7B5 1709 aaKnown RBP6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 PplQ9R269 1755 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Nkx2-3P97334 362 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Eno4Q8C042 619 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Nubp1Q9R060 320 aa6.41□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Kif24Q6NWW5 1356 aa6.4□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Kdm2bQ6P1G2 1309 aa6.4□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 VegfbP49766 207 aa6.4□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 HnrnpmQ9D0E1 729 aaKnown RBP6.4□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Q9D9H8 365 aa6.4□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Arih1Q9Z1K5 555 aa6.4□□□□□ -1.38
Hmgb1-203ENSMUST00000110505 Arhgef28P97433 1693 aa6.4□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Iqgap3F8VQ29 1632 aa6.4□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Rprd2Q6NXI6 1469 aaKnown RBP6.4□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 EomesO54839 707 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Gigyf2Q6Y7W8 1291 aaKnown RBP6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Limd1Q9QXD8 668 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Zfp142G5E869 1843 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Cd109Q8R422 1442 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 KdrP35918 1367 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Gm3233E9Q2H5 230 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Laptm4aQ60961 233 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Mical1Q8VDP3 1048 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Trip6Q9Z1Y4 480 aa6.39□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Tecpr2Q3UH45 1423 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Nsd2Q8BVE8 1365 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Ttll5Q8CHB8 1328 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Mroh1E0CZ22 1640 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 MlanaQ2TA50 113 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Cln3Q61124 438 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Plpp7Q91WB2 271 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Dapk1Q80YE7 1442 aa6.38□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 C3P01027 1663 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Pramef25A2ASI9 494 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Zfr2E9Q5M4 874 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 NptxrQ99J85 493 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 NalcnQ8BXR5 1738 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Pik3c2bE9QAN8 1632 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Abcc10Q8R4P9 1501 aa6.37□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Marf1Q8BJ34 1730 aaKnown RBP6.36□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Cul4bA2A432 970 aaKnown RBP6.36□□□□□ -1.39
Hmgb1-203ENSMUST00000110505 Gm20521D3Z5F7 333 aa6.36□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms