RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Ncoa3O09000 1398 aa20.74■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Smc1bQ920F6 1248 aa20.74■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ubap1lG3UW59 384 aa20.74■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Tacc1Q6Y685 774 aa20.73■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Aldh1l2Q8K009 923 aa20.73■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Cep89Q9CZX2 791 aa20.73■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Gbp4Q61107 620 aa20.73■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Polr3dQ91WD1 398 aa20.73■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Mug2P28666 1451 aa20.72■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ccdc158Q8CDI6 1109 aa20.72■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Rad23bP54728 416 aa20.72■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Stat1P42225 749 aa20.72■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Nap1l5Q9JJF0 156 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ttc21aQ8C0S4 1314 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Jade2Q6ZQF7 829 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Echdc1Q9D9V3 322 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Trappc8E9PWG2 1437 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ankib1Q6ZPS6 1085 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Wdr7Q920I9 1489 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Cfap73J3QPZ5 306 aa20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ccar2Q8VDP4 922 aaKnown RBP20.71■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Rrs1Q9CYH6 365 aaKnown RBP20.7■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Rapgef4Q9EQZ6 1011 aa20.7■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Supt6hQ62383 1726 aaKnown RBP20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Gm42641I6L9G2 585 aa20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Rnf41Q8BH75 317 aa20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 AtripQ8BMG1 785 aa20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 GpkowQ56A08 488 aa20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Erich3F6QRE9 1637 aa20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Pdia3P27773 505 aaKnown RBP20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Tmem67Q8BR76 992 aa20.7■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ano10Q8BH79 659 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ncbp3Q8BZR9 615 aaKnown RBP20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Znf287Q9EQB9 759 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Nphp3Q7TNH6 1325 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Tubb4bP68372 445 aaKnown RBP20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Gm21680A0A0G2JGR8 267 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Irf9Q61179 399 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ccdc73Q8CDM4 1066 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Atp10dQ8K2X1 1416 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Dnajc2P54103 621 aaKnown RBP20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Tspyl3Q3UYP3 334 aa20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Tex2Q6ZPJ0 1128 aaKnown RBP20.69■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Kdm3aQ6PCM1 1323 aa20.68■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 GphnQ8BUV3 769 aaKnown RBP20.68■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Pola1P33609 1465 aa20.68■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Brd3Q8K2F0 726 aaKnown RBP20.68■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Gm18336A0A140LIU8 765 aa20.68■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Zbtb22Q9Z0G7 638 aa20.68■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Rnf187Q8BFX1 236 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Kdm4aQ8BW72 1064 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Rad50P70388 1312 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Nucb1Q02819 459 aaKnown RBP20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Znf692Q3U381 531 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Cfap69Q8BH53 942 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 TnnQ80Z71 1560 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Mipol1Q9D9F8 279 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Shroom2A2ALU4 1481 aa20.67■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Dync1i1O88485 628 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Cers3Q1A3B0 383 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Tsg101Q61187 391 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 NapbP28663 298 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Gnat3Q3V3I2 354 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ccdc93Q7TQK5 629 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Mapk8ip1Q9WVI9 707 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Atp8b2P98199 1209 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Egfem1Q8C088 590 aa20.66■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Mapkbp1Q6NS57 1503 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ccdc112A0AUP1 442 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Kif2aP28740 705 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ccdc162pQ0VG85 912 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Secisbp2lQ6A098 1086 aaKnown RBP20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Nlrp3Q8R4B8 1033 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Smco2Q9DA21 347 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Ncapg2Q6DFV1 1138 aa20.65■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 Clul1Q3ZRW6 464 aa20.64■□□□□ 0.9
Col4a3bp-202ENSMUST00000109444 GmnnO88513 206 aa20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Knop1Q9Z2Q2 478 aaKnown RBP20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Exoc8Q6PGF7 716 aa20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Naa15Q80UM3 865 aaKnown RBP20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 FanclQ9CR14 375 aa20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Tmx3Q8BXZ1 456 aa20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Krt23Q99PS0 422 aa20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Dydc1Q9D9T0 175 aa20.64■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Zeb2Q9R0G7 1215 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Slc7a3P70423 618 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Chpf2Q3UU43 768 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Cfap53Q9D439 514 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ccdc94Q9D6J3 314 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Ccdc121E9Q6D3 323 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Traf3ip1Q149C2 625 aa20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Rbm5Q91YE7 815 aaKnown RBP20.63■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Api5O35841 504 aaKnown RBP20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Txndc16Q7TN22 820 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Kdm4cQ8VCD7 1054 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Baiap2l1Q9DBJ3 514 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Evi5lH3BKQ3 813 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 TimelessQ9R1X4 1197 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 IncenpQ9WU62 880 aa20.62■□□□□ 0.89
Col4a3bp-202ENSMUST00000109444 Kdm5bQ80Y84 1544 aa20.62■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms