RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Cct4P80315 539 aaKnown RBP9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Map4k4P97820 1233 aaKnown RBP9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Limch1Q3UH68 1057 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Bloc1s2Q9CWG9 143 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Top2bQ64511 1612 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Naa25Q8BWZ3 972 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cnnm1Q0GA42 951 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Mrpl44Q9CY73 333 aaKnown RBP9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Plagl1Q9JLQ4 704 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Sept6Q9R1T4 434 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 A2mQ6GQT1 1474 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Naip2Q9QUK4 1447 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gm7298A0A0N4SVU1 1476 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 AidaQ8C4Q6 305 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gm3409A0A0G2JE67 319 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Lrrfip1Q3UZ39 729 aaKnown RBP9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Igsf3Q6ZQA6 1194 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Lrrcc1Q69ZB0 1026 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Txndc16Q7TN22 820 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 LlphQ9D945 130 aaKnown RBP9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Aplp1Q03157 653 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cul9Q80TT8 1865 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Srgap1Q91Z69 1062 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Nol7Q9D7Z3 254 aaKnown RBP9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ddx49Q4FZF3 480 aaKnown RBP9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 PsapQ61207 557 aaKnown RBP9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Tacc1Q6Y685 774 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cfap53Q9D439 514 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Smco2Q9DA21 347 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Fbxo3Q9DC63 480 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Map3k5O35099 1380 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Wasf1Q8R5H6 559 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Akap8Q9DBR0 687 aaKnown RBP9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gm10093D3YYI8 482 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Hdac1O09106 482 aaKnown RBP9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Hdhd2Q3UGR5 259 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Q3UPC7 1272 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ccdc148Q6P5U8 527 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 TefQ9JLC6 301 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 MpndQ3TV65 487 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ctdp1Q7TSG2 960 aa9.29□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ano2Q8CFW1 1002 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 NexmifQ5DTT1 1515 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Zscan20B2KFW1 1030 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Clul1Q3ZRW6 464 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 IbtkQ6ZPR6 1352 aaKnown RBP9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Pnpla2Q8BJ56 486 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Lrrc45Q8CIM1 670 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Brd3Q8K2F0 726 aaKnown RBP9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Polr3dQ91WD1 398 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 F2rP30558 430 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ccdc150Q8CDI7 1110 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Tmem67Q8BR76 992 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Smtnl1Q99LM3 459 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Naa15Q80UM3 865 aaKnown RBP9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Klhl30Q8C3F7 581 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Irx4Q9QY61 515 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 TnikP83510 1323 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ctnnbl1Q9CWL8 563 aaKnown RBP9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cdk19Q8BWD8 501 aa9.28□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gjc1P28229 396 aa9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Homer1Q9Z2Y3 366 aa9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gm28510A0A087WP28 240 aa9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ces1hD3Z298 562 aa9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 L1td1Q587J6 782 aaKnown RBP9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Synpo2Q91YE8 1087 aaKnown RBP9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Rrs1Q9CYH6 365 aaKnown RBP9.27□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Prl7d1P04769 244 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Klhl10Q9D5V2 608 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Ccdc186Q8C9S4 917 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Brms1Q99N20 246 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Pdia3P27773 505 aaKnown RBP9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Ankib1Q6ZPS6 1085 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Shtn1Q8K2Q9 631 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Znf653Q6YND2 615 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Knop1Q9Z2Q2 478 aaKnown RBP9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Plekhd1B2RPU2 505 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Top1Q04750 767 aaKnown RBP9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Tceanc2Q8R2M0 207 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Dapk3O54784 448 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Anp32cQ64G17 123 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Spata24Q6P926 205 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Psmb7P70195 277 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Paip2Q9D6V8 124 aa9.27□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Wdr3Q8BHB4 942 aaKnown RBP9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 TatQ8QZR1 454 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Atf7Q8R0S1 413 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 CitP49025 2055 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Myh6Q02566 1938 aaKnown RBP9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Il1rapl2Q9ERS6 686 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Slx4Q6P1D7 1565 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Frat1P70339 274 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Vps41Q5KU39 853 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 4930548H24RikQ9D496 437 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Slx4ipQ9D7Y9 413 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Stard3nlQ9DCI3 235 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Elf2Q9JHC9 593 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Capn2O08529 700 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Sdc2P43407 202 aa9.26□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Ddx46Q569Z5 1032 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms