RNA–Protein interactions for RNA: ENSMUST00000108810.9

Trim11-203, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-203ENSMUST00000108810 ArxO35085 564 aa18.42■□□□□ 0.54
Trim11-203ENSMUST00000108810 PigbQ9JJQ0 542 aa18.42■□□□□ 0.54
Trim11-203ENSMUST00000108810 Pdia3P27773 505 aaKnown RBP18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Bcar3Q9QZK2 820 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Cfdp1O88271 295 aaKnown RBP18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Nucb1Q02819 459 aaKnown RBP18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Ppm1mQ8BU27 406 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Slc5a1Q8C3K6 665 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 TefQ9JLC6 301 aa18.41■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm21663A0A0G2JE01 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm7361D3Z6R1 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 5031410I06RikE9Q4E0 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm1979E9QAN3 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm5862K7N5V5 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Gm10220K7N660 267 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Prkab2Q6PAM0 271 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Smim5Q8BT42 78 aa18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Eif3aP23116 1344 aaKnown RBP18.4■□□□□ 0.54
Trim11-203ENSMUST00000108810 Bicc1Q99MQ1 977 aaKnown RBP18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Col4a1P02463 1669 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Akap11E9Q777 1895 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Cnnm1Q0GA42 951 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Map3k13Q1HKZ5 959 aa18.39■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ints5Q8CHT3 1018 aa18.38■□□□□ 0.53
Trim11-203ENSMUST00000108810 Efcab2Q9CQ46 164 aa18.38■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ttll7A4Q9F0 912 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tgfb1i1Q62219 461 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ptpdc1Q6NZK8 747 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tfip11Q9ERA6 838 aaKnown RBP18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Gm21680A0A0G2JGR8 267 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Zkscan2G3X952 960 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 GorabQ8BRM2 368 aa18.37■□□□□ 0.53
Trim11-203ENSMUST00000108810 Hoxa7P02830 229 aa18.36■□□□□ 0.53
Trim11-203ENSMUST00000108810 RestQ8VIG1 1082 aa18.36■□□□□ 0.53
Trim11-203ENSMUST00000108810 AceP09470 1312 aa18.36■□□□□ 0.53
Trim11-203ENSMUST00000108810 Mum1Q6DID5 682 aa18.35■□□□□ 0.53
Trim11-203ENSMUST00000108810 Grm8P47743 908 aa18.35■□□□□ 0.53
Trim11-203ENSMUST00000108810 Kiaa0232Q80U59 1396 aaKnown RBP18.35■□□□□ 0.53
Trim11-203ENSMUST00000108810 Ppip5k2Q6ZQB6 1129 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Q9D2X8 372 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tceal9Q9DD24 104 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Rnf123Q5XPI3 1314 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Terf2O35144 541 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Slc39a6Q8C145 765 aa18.34■□□□□ 0.53
Trim11-203ENSMUST00000108810 Catsper2A2ARP9 588 aa18.33■□□□□ 0.53
Trim11-203ENSMUST00000108810 EngaseQ8BX80 734 aa18.33■□□□□ 0.53
Trim11-203ENSMUST00000108810 Abcc4E9Q236 1325 aa18.33■□□□□ 0.53
Trim11-203ENSMUST00000108810 Tpx2A2APB8 745 aaKnown RBP18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 Hspa2P17156 633 aa18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 Slc4a10Q5DTL9 1118 aa18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 MypnQ5DTJ9 1315 aa18.33■□□□□ 0.52
Trim11-203ENSMUST00000108810 Lmbr1lQ9D1E5 489 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Elp1Q7TT37 1333 aaKnown RBP18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ank1Q02357 1862 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Crb1Q8VHS2 1405 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 Hmox1P14901 289 aa18.32■□□□□ 0.52
Trim11-203ENSMUST00000108810 CalcaP70160 136 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Cct4P80315 539 aaKnown RBP18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Prune1Q8BIW1 454 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Trim52Q8CDV4 233 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Gimap5Q8BWF2 308 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Flad1Q8R123 492 aa18.31■□□□□ 0.52
Trim11-203ENSMUST00000108810 Sipa1l3G3X9J0 1776 aa18.3■□□□□ 0.52
Trim11-203ENSMUST00000108810 Noc3lQ8VI84 807 aaKnown RBP18.3■□□□□ 0.52
Trim11-203ENSMUST00000108810 Erbb4Q61527 1308 aa18.3■□□□□ 0.52
Trim11-203ENSMUST00000108810 Nlrp9bQ66X22 1003 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Kdm4cQ8VCD7 1054 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Nol8Q3UHX0 1147 aaKnown RBP18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ankle2Q6P1H6 964 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Erc2Q6PH08 957 aa18.29■□□□□ 0.52
Trim11-203ENSMUST00000108810 Pa2g4P50580 394 aaKnown RBP18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 Znf526Q8BI66 675 aa18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ybx3Q9JKB3 361 aaKnown RBP18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 Cyb5rlB1AS42 316 aa18.28■□□□□ 0.52
Trim11-203ENSMUST00000108810 VgfQ0VGU4 617 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 1700010I14RikQ7TPG0 532 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 Ripor2Q80U16 1078 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 Nav1Q8CH77 1875 aa18.27■□□□□ 0.52
Trim11-203ENSMUST00000108810 Kcnh4A2A5F7 1018 aa18.27■□□□□ 0.51
Trim11-203ENSMUST00000108810 Unc5clQ6R653 518 aa18.27■□□□□ 0.51
Trim11-203ENSMUST00000108810 Zbtb3Q91X45 518 aa18.26■□□□□ 0.51
Trim11-203ENSMUST00000108810 Nsfl1cQ9CZ44 370 aaKnown RBP18.26■□□□□ 0.51
Trim11-203ENSMUST00000108810 Mrc1Q61830 1456 aa18.26■□□□□ 0.51
Trim11-203ENSMUST00000108810 Syde2E9PUP1 1314 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 InsrrQ9WTL4 1300 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Zbtb40Q6PCS8 1258 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Kat6bQ8BRB7 1872 aa18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Tnrc6cQ3UHC0 1690 aaKnown RBP18.25■□□□□ 0.51
Trim11-203ENSMUST00000108810 Mast2Q60592 1734 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Lrp6O88572 1613 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Pdlim2Q8R1G6 349 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Antxr1Q9CZ52 562 aa18.24■□□□□ 0.51
Trim11-203ENSMUST00000108810 Ddx58Q6Q899 926 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Htatsf1Q8BGC0 757 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Bcl2l12Q9D3J3 255 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 NmiO35309 314 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Fam228bQ497Q6 232 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Zeb2Q9R0G7 1215 aa18.23■□□□□ 0.51
Trim11-203ENSMUST00000108810 Lrrc59Q922Q8 307 aaKnown RBP18.22■□□□□ 0.51
Trim11-203ENSMUST00000108810 Ccnl1Q52KE7 532 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 103.5 ms