RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Larp1Q6ZQ58 1072 aaKnown RBP22.53■■□□□ 1.2
Trim47-202ENSMUST00000106441 CenppQ9CZ92 286 aa22.53■■□□□ 1.2
Trim47-202ENSMUST00000106441 Aplp1Q03157 653 aa22.53■■□□□ 1.2
Trim47-202ENSMUST00000106441 Exoc5Q3TPX4 708 aa22.52■■□□□ 1.2
Trim47-202ENSMUST00000106441 Tfip11Q9ERA6 838 aaKnown RBP22.52■■□□□ 1.2
Trim47-202ENSMUST00000106441 DmtnQ9WV69 405 aa22.52■■□□□ 1.2
Trim47-202ENSMUST00000106441 Gm21663A0A0G2JE01 267 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Gm7361D3Z6R1 267 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 5031410I06RikE9Q4E0 267 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Gm1979E9QAN3 267 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Gm5862K7N5V5 267 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Gm10220K7N660 267 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Ddb1Q3U1J4 1140 aaKnown RBP22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Asic4Q7TNS7 539 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Ric3Q8BPM6 367 aa22.51■■□□□ 1.19
Trim47-202ENSMUST00000106441 Ggnbp2Q5SV77 696 aa22.5■■□□□ 1.19
Trim47-202ENSMUST00000106441 Slc5a1Q8C3K6 665 aa22.5■■□□□ 1.19
Trim47-202ENSMUST00000106441 Ssfa2Q922B9 1252 aa22.5■■□□□ 1.19
Trim47-202ENSMUST00000106441 Il4rP16382 810 aa22.49■■□□□ 1.19
Trim47-202ENSMUST00000106441 PappaQ8R4K8 1624 aa22.49■■□□□ 1.19
Trim47-202ENSMUST00000106441 Prim1P20664 417 aa22.48■■□□□ 1.19
Trim47-202ENSMUST00000106441 Paxip1Q6NZQ4 1056 aa22.48■■□□□ 1.19
Trim47-202ENSMUST00000106441 U2surpQ6NV83 1029 aaKnown RBP22.48■■□□□ 1.19
Trim47-202ENSMUST00000106441 Tm6sf1P58749 370 aa22.47■■□□□ 1.19
Trim47-202ENSMUST00000106441 Klhdc4Q921I2 584 aa22.47■■□□□ 1.19
Trim47-202ENSMUST00000106441 Nkx2-3P97334 362 aa22.46■■□□□ 1.19
Trim47-202ENSMUST00000106441 GorabQ8BRM2 368 aa22.46■■□□□ 1.19
Trim47-202ENSMUST00000106441 Senp3Q9EP97 568 aaKnown RBP22.46■■□□□ 1.19
Trim47-202ENSMUST00000106441 Casq1O09165 405 aa22.46■■□□□ 1.19
Trim47-202ENSMUST00000106441 Ubr2Q6WKZ8 1755 aa22.45■■□□□ 1.18
Trim47-202ENSMUST00000106441 Ccdc155Q80VJ8 648 aa22.44■■□□□ 1.18
Trim47-202ENSMUST00000106441 Ccdc146E9Q9F7 977 aa22.43■■□□□ 1.18
Trim47-202ENSMUST00000106441 Ppip5k2Q6ZQB6 1129 aa22.43■■□□□ 1.18
Trim47-202ENSMUST00000106441 Chl1P70232 1209 aa22.42■■□□□ 1.18
Trim47-202ENSMUST00000106441 EngaseQ8BX80 734 aa22.42■■□□□ 1.18
Trim47-202ENSMUST00000106441 Taok3Q8BYC6 898 aa22.42■■□□□ 1.18
Trim47-202ENSMUST00000106441 Ddrgk1Q80WW9 315 aa22.42■■□□□ 1.18
Trim47-202ENSMUST00000106441 ApobrQ8VBT6 942 aa22.42■■□□□ 1.18
Trim47-202ENSMUST00000106441 Btbd11Q6GQW0 1109 aa22.41■■□□□ 1.18
Trim47-202ENSMUST00000106441 Pibf1E9Q6K3 756 aa22.4■■□□□ 1.18
Trim47-202ENSMUST00000106441 Fam13aQ8BGI4 693 aa22.4■■□□□ 1.18
Trim47-202ENSMUST00000106441 1700019A02RikA0A087WPV9 146 aa22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 Triml2E9PW10 424 aa22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 Nucb1Q02819 459 aaKnown RBP22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 Ccnl1Q52KE7 532 aaKnown RBP22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 Ppp6r3Q922D4 844 aa22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 FanclQ9CR14 375 aa22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 Trim44Q9QXA7 346 aa22.39■■□□□ 1.18
Trim47-202ENSMUST00000106441 Tjp1P39447 1745 aaKnown RBP22.38■■□□□ 1.17
Trim47-202ENSMUST00000106441 Phf23Q8BSN5 401 aa22.38■■□□□ 1.17
Trim47-202ENSMUST00000106441 Crb1Q8VHS2 1405 aa22.38■■□□□ 1.17
Trim47-202ENSMUST00000106441 DekQ7TNV0 380 aaKnown RBP22.37■■□□□ 1.17
Trim47-202ENSMUST00000106441 Ints5Q8CHT3 1018 aa22.37■■□□□ 1.17
Trim47-202ENSMUST00000106441 Foxp4Q9DBY0 795 aaKnown RBP22.37■■□□□ 1.17
Trim47-202ENSMUST00000106441 Pdia3P27773 505 aaKnown RBP22.36■■□□□ 1.17
Trim47-202ENSMUST00000106441 PtmsQ9D0J8 101 aaKnown RBP22.36■■□□□ 1.17
Trim47-202ENSMUST00000106441 4930523C07RikE9Q2T4 99 aa22.36■■□□□ 1.17
Trim47-202ENSMUST00000106441 Tpm2P58774 284 aa22.36■■□□□ 1.17
Trim47-202ENSMUST00000106441 Igsf1Q7TQA1 1317 aa22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 Clcn1Q64347 994 aa22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 Zkscan1Q8BGS3 561 aaKnown RBP22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 Bag4Q8CI61 457 aa22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 Irx6Q9ER75 438 aa22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 GakQ99KY4 1305 aa22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 PogkQ80TC5 607 aa22.35■■□□□ 1.17
Trim47-202ENSMUST00000106441 Ly75Q60767 1723 aa22.34■■□□□ 1.17
Trim47-202ENSMUST00000106441 Znf692Q3U381 531 aa22.33■■□□□ 1.17
Trim47-202ENSMUST00000106441 Prkar2bP31324 416 aa22.33■■□□□ 1.16
Trim47-202ENSMUST00000106441 Rnf123Q5XPI3 1314 aa22.33■■□□□ 1.16
Trim47-202ENSMUST00000106441 Tex2Q6ZPJ0 1128 aaKnown RBP22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 Bloc1s4Q8VED2 215 aa22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 ScaperF8VQ70 1398 aaKnown RBP22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 Col1a2Q01149 1372 aa22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 Eif4a1P60843 406 aaKnown RBP22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 Aifm3Q3TY86 605 aa22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 Bsdc1Q80Y55 427 aa22.32■■□□□ 1.16
Trim47-202ENSMUST00000106441 Tnnt1O88346 262 aa22.31■■□□□ 1.16
Trim47-202ENSMUST00000106441 Q3TQI7 289 aaKnown RBP22.31■■□□□ 1.16
Trim47-202ENSMUST00000106441 Tmx3Q8BXZ1 456 aa22.31■■□□□ 1.16
Trim47-202ENSMUST00000106441 Rtn4Q99P72 1162 aaKnown RBP22.31■■□□□ 1.16
Trim47-202ENSMUST00000106441 Efcab2Q9CQ46 164 aa22.31■■□□□ 1.16
Trim47-202ENSMUST00000106441 Cyp46a1Q9WVK8 500 aa22.31■■□□□ 1.16
Trim47-202ENSMUST00000106441 AceP09470 1312 aa22.3■■□□□ 1.16
Trim47-202ENSMUST00000106441 Ubap1lG3UW59 384 aa22.3■■□□□ 1.16
Trim47-202ENSMUST00000106441 Sugp2Q8CH09 1067 aa22.3■■□□□ 1.16
Trim47-202ENSMUST00000106441 Dlg5E9Q9R9 1921 aa22.3■■□□□ 1.16
Trim47-202ENSMUST00000106441 Tiam2Q6ZPF3 1715 aa22.3■■□□□ 1.16
Trim47-202ENSMUST00000106441 Chpf2Q3UU43 768 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Mrps27Q8BK72 415 aaKnown RBP22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Cyp2d12Q8BVD2 504 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Zcrb1Q9CZ96 217 aaKnown RBP22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Shank3Q4ACU6 1730 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 SlkO54988 1233 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 ImpactO55091 318 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Ppp6r1Q7TSI3 856 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Pnpla7A2AJ88 1352 aa22.29■■□□□ 1.16
Trim47-202ENSMUST00000106441 Hdac6Q9Z2V5 1149 aa22.28■■□□□ 1.16
Trim47-202ENSMUST00000106441 Atg4a-psA0A0G2JFS9 396 aa22.28■■□□□ 1.16
Trim47-202ENSMUST00000106441 Ppfibp2O35711 882 aa22.28■■□□□ 1.16
Trim47-202ENSMUST00000106441 Atg4aQ8C9S8 396 aa22.28■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 88.8 ms