RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Sox12Q04890 314 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.68□□□□□ -0.38
Tro-201ENSMUST00000087253 Babam1Q3UI43 333 aa12.68□□□□□ -0.38
Tro-201ENSMUST00000087253 Casc1Q6TDU8 730 aa12.68□□□□□ -0.38
Tro-201ENSMUST00000087253 Dennd6aQ8BH65 605 aa12.68□□□□□ -0.38
Tro-201ENSMUST00000087253 Nol11Q8BJW5 723 aaKnown RBP12.68□□□□□ -0.38
Tro-201ENSMUST00000087253 Naa30Q8CES0 364 aa12.68□□□□□ -0.38
Tro-201ENSMUST00000087253 Mum1Q6DID5 682 aa12.67□□□□□ -0.38
Tro-201ENSMUST00000087253 Pdcl2Q78Y63 240 aa12.67□□□□□ -0.38
Tro-201ENSMUST00000087253 Slc35g1Q8BY79 368 aa12.67□□□□□ -0.38
Tro-201ENSMUST00000087253 Stk3Q9JI10 497 aa12.67□□□□□ -0.38
Tro-201ENSMUST00000087253 Wdr17E9Q271 1322 aa12.67□□□□□ -0.38
Tro-201ENSMUST00000087253 Pnma3Q8JZW8 466 aa12.67□□□□□ -0.38
Tro-201ENSMUST00000087253 Nckap5lQ6GQX2 1323 aa12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 AnlnQ8K298 1121 aaKnown RBP12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 LlphQ9D945 130 aaKnown RBP12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 Hoxc9P09633 260 aa12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 Plppr3Q7TPB0 716 aa12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 Kdm6aO70546 1401 aa12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 Kdm4aQ8BW72 1064 aa12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 E4f1Q8CCE9 783 aa12.66□□□□□ -0.38
Tro-201ENSMUST00000087253 ScaperF8VQ70 1398 aaKnown RBP12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Lmod3E9QA62 571 aa12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Atp6v1dP57746 247 aa12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Igsf1Q7TQA1 1317 aa12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Mindy4Q3UQI9 744 aa12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Pof1bQ8K4L4 587 aa12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Slx4ipQ9D7Y9 413 aa12.65□□□□□ -0.38
Tro-201ENSMUST00000087253 Phf23Q8BSN5 401 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Ap3b2Q9JME5 1082 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 EappQ5BU09 281 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Samm50Q8BGH2 469 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Glipr1l2Q9CQ35 332 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Tpx2A2APB8 745 aaKnown RBP12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Slc4a10Q5DTL9 1118 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Kcna6Q61923 529 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 Cabp4Q8VHC5 271 aa12.64□□□□□ -0.39
Tro-201ENSMUST00000087253 F2rP30558 430 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 Ccne1Q61457 408 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 KinQ8K339 391 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 Zbtb22Q9Z0G7 638 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 Eya1P97767 591 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 Pdzrn3Q69ZS0 1063 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 Pmfbp1Q9WVQ0 1022 aa12.63□□□□□ -0.39
Tro-201ENSMUST00000087253 Mmp8O70138 465 aa12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Utp3Q9JI13 469 aaKnown RBP12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Smarce1O54941 411 aaKnown RBP12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 MyclP10166 368 aa12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Mcm3P25206 812 aaKnown RBP12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Bach1P97302 739 aa12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Gpatch11Q3UFS4 262 aa12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Mlh1Q9JK91 760 aa12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Bms1Q6PGF5 1284 aaKnown RBP12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Slain2Q8CI08 581 aa12.62□□□□□ -0.39
Tro-201ENSMUST00000087253 Zfp142G5E869 1843 aa12.61□□□□□ -0.39
Tro-201ENSMUST00000087253 TnrQ8BYI9 1358 aa12.61□□□□□ -0.39
Tro-201ENSMUST00000087253 Chrna2Q91X60 512 aa12.61□□□□□ -0.39
Tro-201ENSMUST00000087253 Atp8b2P98199 1209 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Usp48Q3V0C5 1052 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Amigo3Q8C2S7 508 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Serpina10Q8R121 448 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Brpf1B2RRD7 1212 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 TimelessQ9R1X4 1197 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Abcc12Q80WJ6 1366 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Gm21190A0A0G2JGJ6 266 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 NcapgE9PWG6 1004 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Elmsan1E9Q2I4 1089 aaKnown RBP12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Adcy5P84309 1262 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Gimap6Q8K349 305 aa12.6□□□□□ -0.39
Tro-201ENSMUST00000087253 Gjb2Q00977 226 aa12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 Mad1l1Q9WTX8 717 aaKnown RBP12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 MsnP26041 577 aaKnown RBP12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 Map3k13Q1HKZ5 959 aa12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 Chpf2Q3UU43 768 aa12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 Anp32cQ64G17 123 aa12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 Ints3Q7TPD0 1041 aaKnown RBP12.59□□□□□ -0.39
Tro-201ENSMUST00000087253 PappaQ8R4K8 1624 aa12.58□□□□□ -0.39
Tro-201ENSMUST00000087253 Bach2P97303 839 aa12.58□□□□□ -0.39
Tro-201ENSMUST00000087253 Utp18Q5SSI6 552 aaKnown RBP12.58□□□□□ -0.39
Tro-201ENSMUST00000087253 Mcmdc2E9Q956 681 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 CgnP59242 1191 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Gys2Q8VCB3 704 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Ccar2Q8VDP4 922 aaKnown RBP12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Smc3Q9CW03 1217 aaKnown RBP12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Tjp1P39447 1745 aaKnown RBP12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Cavin1O54724 392 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Anapc15P60007 132 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Unc5clQ6R653 518 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Rapgef3Q8VCC8 918 aa12.58□□□□□ -0.4
Tro-201ENSMUST00000087253 Casz1Q9CWL2 1761 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Nol8Q3UHX0 1147 aaKnown RBP12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Tns2Q8CGB6 1400 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Slit1Q80TR4 1531 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Atp10bB1AWN4 1474 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Ccdc173A0JLY1 547 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Zbtb45Q52KG4 520 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Polr3gQ6NXY9 223 aa12.57□□□□□ -0.4
Tro-201ENSMUST00000087253 Kcnh5Q920E3 988 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Stx6Q9JKK1 255 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Simc1E9Q6E9 1354 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 100.1 ms