RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Gnai2P08752 355 aaKnown RBP9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Fkbp4P30416 458 aa9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Ccdc155Q80VJ8 648 aa9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Atg3Q9CPX6 314 aa9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Gcc1Q9D4H2 778 aa9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Taf7Q9R1C0 341 aa9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Stk36Q69ZM6 1316 aa9.38□□□□□ -0.91
Trim40-201ENSMUST00000087158 Cyp2d11P24457 504 aa9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 Mcm2P97310 904 aa9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 Asic4Q7TNS7 539 aa9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 Acsbg1Q99PU5 721 aa9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 ScaperF8VQ70 1398 aaKnown RBP9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 Morc2aQ69ZX6 1030 aa9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 Eif2s2Q99L45 331 aaKnown RBP9.37□□□□□ -0.91
Trim40-201ENSMUST00000087158 Hsp90ab1P11499 724 aaKnown RBP9.36□□□□□ -0.91
Trim40-201ENSMUST00000087158 Iqsec3Q3TES0 1195 aa9.36□□□□□ -0.91
Trim40-201ENSMUST00000087158 Cog6Q8R3I3 657 aa9.36□□□□□ -0.91
Trim40-201ENSMUST00000087158 Pard3Q99NH2 1333 aa9.36□□□□□ -0.91
Trim40-201ENSMUST00000087158 Wdr63B2RY71 923 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Tbc1d32Q3URV1 1296 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Cypt2Q6P924 180 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Speer4bQ9D9F7 267 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Qtrt2B8ZXI1 415 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 SympkQ80X82 1284 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Slc5a1Q8C3K6 665 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Slc5a4bQ91ZP4 660 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 FanclQ9CR14 375 aa9.35□□□□□ -0.91
Trim40-201ENSMUST00000087158 Bcl2l13P59017 434 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Atp8b2P98199 1209 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Bend3Q6PAL0 825 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 TefQ9JLC6 301 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Adcy9P51830 1353 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Srgap3Q812A2 1099 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Ppp1r42Q8R1Z4 357 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Pdia6Q922R8 440 aaKnown RBP9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Flt4P35917 1363 aa9.34□□□□□ -0.91
Trim40-201ENSMUST00000087158 Gm21663A0A0G2JE01 267 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Gm7361D3Z6R1 267 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 5031410I06RikE9Q4E0 267 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Gm1979E9QAN3 267 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Gm5862K7N5V5 267 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Gm10220K7N660 267 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Hoxa7P02830 229 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Larp1Q6ZQ58 1072 aaKnown RBP9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Nphp1Q9QY53 687 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Zbtb12Q9Z150 459 aa9.33□□□□□ -0.92
Trim40-201ENSMUST00000087158 Gm21680A0A0G2JGR8 267 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Exoc6bA6H5Z3 810 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ccdc146E9Q9F7 977 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Mmp8O70138 465 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Irf9Q61179 399 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Htatsf1Q8BGC0 757 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Smim5Q8BT42 78 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Atg4a-psA0A0G2JFS9 396 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Cfdp1O88271 295 aaKnown RBP9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Zap70P43404 618 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 HellsQ60848 821 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Map3k2Q61083 619 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Atg4aQ8C9S8 396 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ferd3lQ923Z4 168 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ybx3Q9JKB3 361 aaKnown RBP9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Zeb2Q9R0G7 1215 aa9.32□□□□□ -0.92
Trim40-201ENSMUST00000087158 Eif3aP23116 1344 aaKnown RBP9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Mfap1aC0HKD8 439 aaKnown RBP9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Mfap1bC0HKD9 439 aaKnown RBP9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Sema6bO54951 886 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Cnnm1Q0GA42 951 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Cwc27Q3TKY6 469 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Mphosph10Q810V0 681 aaKnown RBP9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Lrrc59Q922Q8 307 aaKnown RBP9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Akap11E9Q777 1895 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Sptbn5F6UCX4 1208 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Rabep1O35551 862 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Smarca5Q91ZW3 1051 aaKnown RBP9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Efcab2Q9CQ46 164 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 CenppQ9CZ92 286 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 PigbQ9JJQ0 542 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Cyp46a1Q9WVK8 500 aa9.31□□□□□ -0.92
Trim40-201ENSMUST00000087158 Mcmdc2E9Q956 681 aa9.3□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ier5O89113 308 aa9.3□□□□□ -0.92
Trim40-201ENSMUST00000087158 MycnP03966 462 aaKnown RBP9.3□□□□□ -0.92
Trim40-201ENSMUST00000087158 Tjp1P39447 1745 aaKnown RBP9.3□□□□□ -0.92
Trim40-201ENSMUST00000087158 Tiam2Q6ZPF3 1715 aa9.3□□□□□ -0.92
Trim40-201ENSMUST00000087158 Anapc15-psA0A140T8L6 141 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Tbc1d9Q3UYK3 1264 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Prkab2Q6PAM0 271 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ggt6Q6PDE7 497 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ddx54Q8K4L0 874 aaKnown RBP9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Flad1Q8R123 492 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Mum1Q6DID5 682 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ppm1mQ8BU27 406 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Ints5Q8CHT3 1018 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Bicc1Q99MQ1 977 aaKnown RBP9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Antxr1Q9CZ52 562 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 4933402E13RikQ9D4D2 429 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Noa1Q9JJG9 693 aaKnown RBP9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 Nek4Q9Z1J2 792 aa9.29□□□□□ -0.92
Trim40-201ENSMUST00000087158 AceP09470 1312 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 PappaQ8R4K8 1624 aa9.28□□□□□ -0.92
Trim40-201ENSMUST00000087158 Kcnh4A2A5F7 1018 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 273.2 ms