RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Ggt6Q6PDE7 497 aa19.58■□□□□ 0.72
Trim50-201ENSMUST00000065785 Eif3aP23116 1344 aaKnown RBP19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ier5O89113 308 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Cypt2Q6P924 180 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ppip5k2Q6ZQB6 1129 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 RgmbQ7TQ33 436 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ccdc9Q8VC31 543 aaKnown RBP19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Kdm4cQ8VCD7 1054 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Irx6Q9ER75 438 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Pard3Q99NH2 1333 aa19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ccdc155Q80VJ8 648 aa19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 SympkQ80X82 1284 aa19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 Elp1Q7TT37 1333 aaKnown RBP19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 Zap70P43404 618 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 1700010I14RikQ7TPG0 532 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 MypopQ8R4U1 393 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Noc3lQ8VI84 807 aaKnown RBP19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Irf9Q61179 399 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Fnbp4Q6ZQ03 1031 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Eif3bQ8JZQ9 803 aaKnown RBP19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Pdlim2Q8R1G6 349 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Exoc6bA6H5Z3 810 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 ArxO35085 564 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Mum1Q6DID5 682 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Pdia6Q922R8 440 aaKnown RBP19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Tfip11Q9ERA6 838 aaKnown RBP19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Bcar3Q9QZK2 820 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Catsper2A2ARP9 588 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Cfdp1O88271 295 aaKnown RBP19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Map3k2Q61083 619 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ptpdc1Q6NZK8 747 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Asic4Q7TNS7 539 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Mphosph10Q810V0 681 aaKnown RBP19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 TefQ9JLC6 301 aa19.52■□□□□ 0.72
Trim50-201ENSMUST00000065785 Kat6bQ8BRB7 1872 aa19.52■□□□□ 0.71
Trim50-201ENSMUST00000065785 GorabQ8BRM2 368 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tceal9Q9DD24 104 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Cct4P80315 539 aaKnown RBP19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Erc2Q6PH08 957 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Emilin2Q8K482 1074 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Zpr1Q62384 459 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 EngaseQ8BX80 734 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Q9D2X8 372 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Fam50bQ9WTJ8 334 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Akap11E9Q777 1895 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Shank2Q80Z38 1476 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 Bcl2l13P59017 434 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 RestQ8VIG1 1082 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 Fer1l6E0CZ42 1862 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tlr7P58681 1050 aa19.48■□□□□ 0.71
Trim50-201ENSMUST00000065785 Ppm1mQ8BU27 406 aa19.48■□□□□ 0.71
Trim50-201ENSMUST00000065785 Nol8Q3UHX0 1147 aaKnown RBP19.47■□□□□ 0.71
Trim50-201ENSMUST00000065785 Antxr1Q9CZ52 562 aa19.47■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tjp1P39447 1745 aaKnown RBP19.47■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tnrc6cQ3UHC0 1690 aaKnown RBP19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 DaxxO35613 739 aa19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 VgfQ0VGU4 617 aa19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 Bicc1Q99MQ1 977 aaKnown RBP19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 Cacna1sQ02789 1880 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Hmox1P14901 289 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Grm8P47743 908 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Slc5a1Q8C3K6 665 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Cnnm1Q0GA42 951 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Mrps27Q8BK72 415 aaKnown RBP19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Abcc4E9Q236 1325 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Slc4a10Q5DTL9 1118 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Psrc1Q9D0P7 329 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Speer4bQ9D9F7 267 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Ddx60E9PZQ1 1711 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Tpx2A2APB8 745 aaKnown RBP19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Map3k13Q1HKZ5 959 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Rsph3aQ3UFY4 516 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Tgfb1i1Q62219 461 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Kiaa0232Q80U59 1396 aaKnown RBP19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm21663A0A0G2JE01 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm7361D3Z6R1 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 5031410I06RikE9Q4E0 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm1979E9QAN3 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm5862K7N5V5 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm10220K7N660 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Zeb2Q9R0G7 1215 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Erbb4Q61527 1308 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 InhbeO08717 350 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Prkab2Q6PAM0 271 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Flad1Q8R123 492 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Mast2Q60592 1734 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Larp1Q6ZQ58 1072 aaKnown RBP19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Eno4Q8C042 619 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Efcab2Q9CQ46 164 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Ccdc129Q14B48 1034 aa19.4■□□□□ 0.7
Trim50-201ENSMUST00000065785 Ankle2Q6P1H6 964 aa19.4■□□□□ 0.7
Trim50-201ENSMUST00000065785 PigbQ9JJQ0 542 aa19.4■□□□□ 0.7
Trim50-201ENSMUST00000065785 Igfbp6P47880 238 aa19.39■□□□□ 0.7
Trim50-201ENSMUST00000065785 Nsfl1cQ9CZ44 370 aaKnown RBP19.39■□□□□ 0.7
Trim50-201ENSMUST00000065785 Lmbr1lQ9D1E5 489 aa19.39■□□□□ 0.7
Trim50-201ENSMUST00000065785 Rfx1P48377 963 aa19.39■□□□□ 0.69
Trim50-201ENSMUST00000065785 Pde3bQ61409 1100 aa19.39■□□□□ 0.69
Trim50-201ENSMUST00000065785 AceP09470 1312 aa19.38■□□□□ 0.69
Trim50-201ENSMUST00000065785 Anapc15P60007 132 aa19.38■□□□□ 0.69
Trim50-201ENSMUST00000065785 Prune1Q8BIW1 454 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms