RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Ggt6Q6PDE7 497 aa19.58■□□□□ 0.72
Trim50-201ENSMUST00000065785 Eif3aP23116 1344 aaKnown RBP19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ier5O89113 308 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Cypt2Q6P924 180 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ppip5k2Q6ZQB6 1129 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 RgmbQ7TQ33 436 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ccdc9Q8VC31 543 aaKnown RBP19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Kdm4cQ8VCD7 1054 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Irx6Q9ER75 438 aa19.57■□□□□ 0.72
Trim50-201ENSMUST00000065785 Pard3Q99NH2 1333 aa19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ccdc155Q80VJ8 648 aa19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 SympkQ80X82 1284 aa19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 Elp1Q7TT37 1333 aaKnown RBP19.56■□□□□ 0.72
Trim50-201ENSMUST00000065785 Zap70P43404 618 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 1700010I14RikQ7TPG0 532 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 MypopQ8R4U1 393 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Noc3lQ8VI84 807 aaKnown RBP19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Irf9Q61179 399 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Fnbp4Q6ZQ03 1031 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Eif3bQ8JZQ9 803 aaKnown RBP19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Pdlim2Q8R1G6 349 aa19.55■□□□□ 0.72
Trim50-201ENSMUST00000065785 Exoc6bA6H5Z3 810 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 ArxO35085 564 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Mum1Q6DID5 682 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Pdia6Q922R8 440 aaKnown RBP19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Tfip11Q9ERA6 838 aaKnown RBP19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Bcar3Q9QZK2 820 aa19.54■□□□□ 0.72
Trim50-201ENSMUST00000065785 Catsper2A2ARP9 588 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Cfdp1O88271 295 aaKnown RBP19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Map3k2Q61083 619 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Ptpdc1Q6NZK8 747 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Asic4Q7TNS7 539 aa19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 Mphosph10Q810V0 681 aaKnown RBP19.53■□□□□ 0.72
Trim50-201ENSMUST00000065785 TefQ9JLC6 301 aa19.52■□□□□ 0.72
Trim50-201ENSMUST00000065785 Kat6bQ8BRB7 1872 aa19.52■□□□□ 0.71
Trim50-201ENSMUST00000065785 GorabQ8BRM2 368 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tceal9Q9DD24 104 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Cct4P80315 539 aaKnown RBP19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Erc2Q6PH08 957 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Emilin2Q8K482 1074 aa19.51■□□□□ 0.71
Trim50-201ENSMUST00000065785 Zpr1Q62384 459 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 EngaseQ8BX80 734 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Q9D2X8 372 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Fam50bQ9WTJ8 334 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Akap11E9Q777 1895 aa19.5■□□□□ 0.71
Trim50-201ENSMUST00000065785 Shank2Q80Z38 1476 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 Bcl2l13P59017 434 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 RestQ8VIG1 1082 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 Fer1l6E0CZ42 1862 aa19.49■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tlr7P58681 1050 aa19.48■□□□□ 0.71
Trim50-201ENSMUST00000065785 Ppm1mQ8BU27 406 aa19.48■□□□□ 0.71
Trim50-201ENSMUST00000065785 Nol8Q3UHX0 1147 aaKnown RBP19.47■□□□□ 0.71
Trim50-201ENSMUST00000065785 Antxr1Q9CZ52 562 aa19.47■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tjp1P39447 1745 aaKnown RBP19.47■□□□□ 0.71
Trim50-201ENSMUST00000065785 Tnrc6cQ3UHC0 1690 aaKnown RBP19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 DaxxO35613 739 aa19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 VgfQ0VGU4 617 aa19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 Bicc1Q99MQ1 977 aaKnown RBP19.46■□□□□ 0.71
Trim50-201ENSMUST00000065785 Cacna1sQ02789 1880 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Hmox1P14901 289 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Grm8P47743 908 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Slc5a1Q8C3K6 665 aa19.45■□□□□ 0.7
Trim50-201ENSMUST00000065785 Cnnm1Q0GA42 951 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Mrps27Q8BK72 415 aaKnown RBP19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Abcc4E9Q236 1325 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Slc4a10Q5DTL9 1118 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Psrc1Q9D0P7 329 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Speer4bQ9D9F7 267 aa19.44■□□□□ 0.7
Trim50-201ENSMUST00000065785 Ddx60E9PZQ1 1711 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Tpx2A2APB8 745 aaKnown RBP19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Map3k13Q1HKZ5 959 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Rsph3aQ3UFY4 516 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Tgfb1i1Q62219 461 aa19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Kiaa0232Q80U59 1396 aaKnown RBP19.43■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm21663A0A0G2JE01 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm7361D3Z6R1 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 5031410I06RikE9Q4E0 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm1979E9QAN3 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm5862K7N5V5 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Gm10220K7N660 267 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Zeb2Q9R0G7 1215 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 Erbb4Q61527 1308 aa19.42■□□□□ 0.7
Trim50-201ENSMUST00000065785 InhbeO08717 350 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Prkab2Q6PAM0 271 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Flad1Q8R123 492 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Mast2Q60592 1734 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Larp1Q6ZQ58 1072 aaKnown RBP19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Eno4Q8C042 619 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Efcab2Q9CQ46 164 aa19.41■□□□□ 0.7
Trim50-201ENSMUST00000065785 Ccdc129Q14B48 1034 aa19.4■□□□□ 0.7
Trim50-201ENSMUST00000065785 Ankle2Q6P1H6 964 aa19.4■□□□□ 0.7
Trim50-201ENSMUST00000065785 PigbQ9JJQ0 542 aa19.4■□□□□ 0.7
Trim50-201ENSMUST00000065785 Igfbp6P47880 238 aa19.39■□□□□ 0.7
Trim50-201ENSMUST00000065785 Nsfl1cQ9CZ44 370 aaKnown RBP19.39■□□□□ 0.7
Trim50-201ENSMUST00000065785 Lmbr1lQ9D1E5 489 aa19.39■□□□□ 0.7
Trim50-201ENSMUST00000065785 Rfx1P48377 963 aa19.39■□□□□ 0.69
Trim50-201ENSMUST00000065785 Pde3bQ61409 1100 aa19.39■□□□□ 0.69
Trim50-201ENSMUST00000065785 AceP09470 1312 aa19.38■□□□□ 0.69
Trim50-201ENSMUST00000065785 Anapc15P60007 132 aa19.38■□□□□ 0.69
Trim50-201ENSMUST00000065785 Prune1Q8BIW1 454 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms