RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Lrrc59Q922Q8 307 aaKnown RBP27.32■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Iqsec3Q3TES0 1195 aa27.31■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Slc5a1Q8C3K6 665 aa27.31■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Bcl2l12Q9D3J3 255 aa27.31■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Eif4g2Q62448 906 aaKnown RBP27.3■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Fam13aQ8BGI4 693 aa27.3■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Pdia6Q922R8 440 aaKnown RBP27.3■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Tbc1d9Q3UYK3 1264 aa27.29■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Qtrt2B8ZXI1 415 aa27.28■■□□□ 1.96
Ptx3-201ENSMUST00000029421 SympkQ80X82 1284 aa27.28■■□□□ 1.96
Ptx3-201ENSMUST00000029421 CenppQ9CZ92 286 aa27.28■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Tom1O88746 492 aa27.27■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Zeb2Q9R0G7 1215 aa27.27■■□□□ 1.96
Ptx3-201ENSMUST00000029421 Plcb2A3KGF7 1181 aa27.26■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Gnai2P08752 355 aaKnown RBP27.25■■□□□ 1.95
Ptx3-201ENSMUST00000029421 TefQ9JLC6 301 aa27.25■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Stk36Q69ZM6 1316 aa27.24■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Adcy9P51830 1353 aa27.24■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Akap11E9Q777 1895 aa27.24■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Atg3Q9CPX6 314 aa27.23■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Ints5Q8CHT3 1018 aa27.23■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Flt4P35917 1363 aa27.23■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Bend3Q6PAL0 825 aa27.22■■□□□ 1.95
Ptx3-201ENSMUST00000029421 PtmsQ9D0J8 101 aaKnown RBP27.22■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Nek4Q9Z1J2 792 aa27.22■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Cnnm1Q0GA42 951 aa27.21■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Efcab2Q9CQ46 164 aa27.21■■□□□ 1.95
Ptx3-201ENSMUST00000029421 PigbQ9JJQ0 542 aa27.21■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Ddit3P35639 168 aa27.21■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Morc2aQ69ZX6 1030 aa27.21■■□□□ 1.95
Ptx3-201ENSMUST00000029421 Casq1O09165 405 aa27.2■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Exoc6bA6H5Z3 810 aa27.19■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Hoxa7P02830 229 aa27.19■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Irf9Q61179 399 aa27.19■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Rrp9Q91WM3 475 aaKnown RBP27.19■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Hspa1lP16627 641 aa27.19■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Prkab2Q6PAM0 271 aa27.19■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Spryd3E9Q9B3 442 aa27.18■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Zap70P43404 618 aa27.17■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Rfx1P48377 963 aa27.17■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Map3k2Q61083 619 aa27.17■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Kcnh4A2A5F7 1018 aa27.17■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Atp8b2P98199 1209 aa27.17■■□□□ 1.94
Ptx3-201ENSMUST00000029421 FanclQ9CR14 375 aa27.17■■□□□ 1.94
Ptx3-201ENSMUST00000029421 AceP09470 1312 aa27.16■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Tjp1P39447 1745 aaKnown RBP27.16■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Elp1Q7TT37 1333 aaKnown RBP27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 PappaQ8R4K8 1624 aa27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Igfbp6P47880 238 aa27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Mphosph10Q810V0 681 aaKnown RBP27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Ppp1r42Q8R1Z4 357 aa27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Nsfl1cQ9CZ44 370 aaKnown RBP27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Tfip11Q9ERA6 838 aaKnown RBP27.15■■□□□ 1.94
Ptx3-201ENSMUST00000029421 ScaperF8VQ70 1398 aaKnown RBP27.14■■□□□ 1.94
Ptx3-201ENSMUST00000029421 Srgap3Q812A2 1099 aa27.13■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Tiam2Q6ZPF3 1715 aa27.13■■□□□ 1.93
Ptx3-201ENSMUST00000029421 HellsQ60848 821 aa27.13■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Ppip5k2Q6ZQB6 1129 aa27.13■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Flad1Q8R123 492 aa27.13■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Cfdp1O88271 295 aaKnown RBP27.12■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Crb1Q8VHS2 1405 aa27.1■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Smarca5Q91ZW3 1051 aaKnown RBP27.1■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Bicc1Q99MQ1 977 aaKnown RBP27.1■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Nphp1Q9QY53 687 aa27.1■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Cwc27Q3TKY6 469 aa27.09■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Zkscan1Q8BGS3 561 aaKnown RBP27.09■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Slc39a6Q8C145 765 aa27.09■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Rnf123Q5XPI3 1314 aa27.09■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Mmp8O70138 465 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Nucb1Q02819 459 aaKnown RBP27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Sik1Q60670 779 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 GorabQ8BRM2 368 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 EngaseQ8BX80 734 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Kcnn1Q9EQR3 537 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Atg4a-psA0A0G2JFS9 396 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Ttll7A4Q9F0 912 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Ccdc146E9Q9F7 977 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Atg4aQ8C9S8 396 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Trim44Q9QXA7 346 aa27.08■■□□□ 1.93
Ptx3-201ENSMUST00000029421 Il4rP16382 810 aa27.07■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ccnl1Q52KE7 532 aaKnown RBP27.07■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ppp6r3Q922D4 844 aa27.07■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Map3k13Q1HKZ5 959 aa27.06■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ppm1mQ8BU27 406 aa27.06■■□□□ 1.92
Ptx3-201ENSMUST00000029421 ApobrQ8VBT6 942 aa27.06■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ginm1Q91WR6 327 aa27.06■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Slc5a4bQ91ZP4 660 aa27.06■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Tlr7P58681 1050 aa27.05■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ccdc129Q14B48 1034 aa27.05■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Shank3Q4ACU6 1730 aa27.05■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ier5O89113 308 aa27.04■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Mst1rQ62190 1378 aa27.04■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Eif3aP23116 1344 aaKnown RBP27.04■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Kat6bQ8BRB7 1872 aa27.04■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Rrp12Q6P5B0 1295 aaKnown RBP27.03■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Ddrgk1Q80WW9 315 aa27.03■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Trim52Q8CDV4 233 aa27.03■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Pdia3P27773 505 aaKnown RBP27.02■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Exoc5Q3TPX4 708 aa27.02■■□□□ 1.92
Ptx3-201ENSMUST00000029421 Bag4Q8CI61 457 aa27.02■■□□□ 1.92
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms