RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PYCR3Q53H96 274 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 CRB2Q5IJ48 1285 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 CLEC12AQ5QGZ9 265 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 USP50Q70EL3 339 aaPredicted RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 LRRC70Q7Z2Q7 622 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 VN1R5Q7Z5H4 357 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ELMOD2Q8IZ81 293 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 KRT78Q8N1N4 520 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 OR9Q2Q8NGE9 314 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 BTN2A2Q8WVV5 523 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 CCM2Q9BSQ5 444 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 HTATIP2Q9BUP3 242 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 EQTNQ9NQ60 294 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ZDHHC3Q9NYG2 299 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ZNF831Q5JPB2 1677 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 TCRBV5S2A0A599 114 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 LAMP1P11279 417 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ETFAP13804 333 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 C4BPBP20851 252 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 TACR1P25103 407 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 BTBD16Q32M84 506 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 SNAP47Q5SQN1 464 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 AGAP6Q5VW22 663 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 DLEU7Q6UYE1 221 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 CFAP206Q8IYR0 622 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 TBC1D19Q8N5T2 526 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 SH3RF2Q8TEC5 729 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 POF1BQ8WVV4 589 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 AGAP4Q96P64 663 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 FCRL4Q96PJ5 515 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ZCCHC2Q9C0B9 1178 aaKnown RBP10.17□□□□□ -0.78
USB1-212ENST00000566082 CSNK1G1Q9HCP0 422 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 INIPQ9NRY2 104 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ABCB8Q9NUT2 735 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 CMAHPQ9Y471 501 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ASB1Q9Y576 335 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ZSCAN5BA6NJL1 495 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 PGRMC2O15173 223 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 HOXA2O43364 376 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 DUSP11O75319 330 aaKnown RBP10.17□□□□□ -0.78
USB1-212ENST00000566082 BCHEP06276 602 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 CASP3P42574 277 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 DAPP51397 102 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 VLDLRP98155 873 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 E2F2Q14209 437 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 SPHARQ15513 63 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 FAM214AQ32MH5 1076 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 SOWAHCQ53LP3 525 aaPredicted RBP10.17□□□□□ -0.78
USB1-212ENST00000566082 CARD16Q5EG05 197 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 FAM171BQ6P995 826 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 RNF130Q86XS8 419 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 NXPE1Q8N323 547 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 RNF175Q8N4F7 328 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 MAPKAP1Q9BPZ7 522 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 RHNO1Q9BSD3 238 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 OR51B5Q9H339 312 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
USB1-212ENST00000566082 CCDC59Q9P031 241 aaKnown RBP10.17□□□□□ -0.78
USB1-212ENST00000566082 SCN1AP35498 2009 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 A0A0G2JN53 185 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 I3L521 148 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 K7ERQ8 282 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 SYN3O14994 580 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 STX11O75558 287 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 PPP2R2BQ00005 443 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 STX4Q12846 297 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 C22orf42Q6IC83 251 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ZNF730Q6ZMV8 503 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ZNF367Q7RTV3 350 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 HDDC2Q7Z4H3 204 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 NRARPQ7Z6K4 114 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ADGRG2Q8IZP9 1017 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 DTX3Q8N9I9 347 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 FAM46DQ8NEK8 389 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 UFD1Q92890 307 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 UBE2E3Q969T4 207 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 ZFP3Q96NJ6 502 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 UCK2Q9BZX2 261 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 CFAP97Q9P2B7 532 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 PCDHGA3Q9Y5H0 932 aa10.17□□□□□ -0.78
USB1-212ENST00000566082 SLC35F4A4IF30 521 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 TSPAN4O14817 238 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CH25HO95992 272 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 KLK1P06870 262 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 FHP07954 510 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CKBP12277 381 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 PRG2P13727 222 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SDC1P18827 310 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 HTR2BP41595 481 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 PGFP49763 221 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 ZNF140P52738 457 aaPredicted RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 MAPK12P53778 367 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 RPS13P62277 151 aaKnown RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 KCNA10Q16322 511 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 IDNKQ5T6J7 187 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 KIAA1161Q6NSJ0 714 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SUSD1Q6UWL2 747 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 THOC6Q86W42 341 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms