RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SDC1P18827 310 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 TACR2P21452 398 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CCDC58Q4VC31 144 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 YIF1BQ5BJH7 314 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CMTM7Q96FZ5 175 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 FUBP3Q96I24 572 aaKnown RBP eCLIP17.04■□□□□ 0.32
RAB40C-205ENST00000539661 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 TSSK3Q96PN8 268 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 SMIM14Q96QK8 99 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CIPCQ9C0C6 399 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 CLPBQ9H078 707 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 AMBNQ9NP70 447 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 ABI2Q9NYB9 513 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-205ENST00000539661 TSR3Q9UJK0 312 aaKnown RBP17.04■□□□□ 0.32
RAB40C-205ENST00000539661 TRPV2Q9Y5S1 764 aa17.04■□□□□ 0.32
RAB40C-205ENST00000539661 A0A0D9SEW6 157 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 MEIOCA2RUB1 952 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 FPGTO14772 594 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 PDYNP01213 254 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 ANXA8P13928 327 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 RFX2P48378 723 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 TUSC3Q13454 348 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 PDE12Q6L8Q7 609 aaKnown RBP17.03■□□□□ 0.32
RAB40C-205ENST00000539661 TLK2Q86UE8 772 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 FAM124AQ86V42 546 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 MIB1Q86YT6 1006 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 EFHBQ8N7U6 833 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 MYEOVQ96EZ4 313 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 TLR8Q9NR97 1041 aaKnown RBP17.03■□□□□ 0.32
RAB40C-205ENST00000539661 PCDHGA2Q9Y5H1 932 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 EFCAB10A6NFE3 127 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 CCRL2O00421 344 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 ADAMDEC1O15204 470 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 KDELR3O43731 214 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 STK16O75716 305 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 CELF2O95319 508 aaKnown RBP17.03■□□□□ 0.32
RAB40C-205ENST00000539661 POMCP01189 267 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 CYP2A7P20853 494 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 KCNJ10P78508 379 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 GALK2Q01415 458 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 NADSYN1Q6IA69 706 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 OR4F3Q6IEY1 312 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 NOXA1Q86UR1 476 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 ATCAYQ86WG3 371 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 SYNPOQ8N3V7 929 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 PANX1Q96RD7 426 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 APOL5Q9BWW9 433 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 RUBCNLQ9H714 662 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 RAD18Q9NS91 495 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 PAQR5Q9NXK6 330 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-205ENST00000539661 ZNF226Q9NYT6 803 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 CNOT2Q9NZN8 540 aaKnown RBP17.03■□□□□ 0.32
RAB40C-205ENST00000539661 PCDHB8Q9UN66 801 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 FNDC3AQ9Y2H6 1198 aaKnown RBP17.03■□□□□ 0.32
RAB40C-205ENST00000539661 ACTL7AQ9Y615 435 aa17.03■□□□□ 0.32
RAB40C-205ENST00000539661 SLC12A8A0AV02 714 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 SLC35F4A4IF30 521 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 A8MVJ9 347 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 F5H5T6 163 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 AP3D1O14617 1153 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 PRMT3O60678 531 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 TBX18O95935 607 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 RRM2P31350 389 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 ALDH9A1P49189 494 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 BNC1Q01954 994 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 SRSF11Q05519 484 aaKnown RBP17.02■□□□□ 0.32
RAB40C-205ENST00000539661 IRF5Q13568 498 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 DUSP7Q16829 419 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 GGTA1PQ4G0N0 100 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 Q6ZPB1 254 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-205ENST00000539661 OR7D4Q8NG98 312 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 SELENOMQ8WWX9 145 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 WDFY2Q96P53 400 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 NEDD4LQ96PU5 975 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 FEVQ99581 238 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 KCNS3Q9BQ31 491 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 MAGEB17A8MXT2 336 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 GFRA2O00451 464 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 SUV39H1O43463 412 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 B3GALT4O96024 378 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 HSMCR30P0CW71 290 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 PRPS1L1P21108 318 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 TACR1P25103 407 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 CPT1AP50416 773 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 SDHAF4Q5VUM1 108 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 GALNT10Q86SR1 603 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 DMRTB1Q96MA1 342 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 MCCC1Q96RQ3 725 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-205ENST00000539661 MGLLQ99685 303 aa17.02■□□□□ 0.32
RAB40C-205ENST00000539661 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.31
RAB40C-205ENST00000539661 SH3D21A4FU49 640 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 KRT87PA6NCN2 255 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 TNFRSF11BO00300 401 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 ZNF623O75123 536 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 F11P03951 625 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 HMBSP08397 361 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 OR4Q2P0C623 313 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 NUDT6P53370 316 aa17.01■□□□□ 0.31
RAB40C-205ENST00000539661 BOP1Q14137 746 aaKnown RBP17.01■□□□□ 0.31
RAB40C-205ENST00000539661 CDKL4Q5MAI5 379 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 336.9 ms