RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SIAEQ9HAT2 523 aa10.24□□□□□ -0.77
USB1-212ENST00000566082 ANKMY1Q9P2S6 941 aa10.24□□□□□ -0.77
USB1-212ENST00000566082 VPS29Q9UBQ0 182 aa10.24□□□□□ -0.77
USB1-212ENST00000566082 SPIN1Q9Y657 262 aaPredicted RBP10.24□□□□□ -0.77
USB1-212ENST00000566082 FZD9O00144 591 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 KIAA0513O60268 411 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 TCF3P15923 654 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 TNFRSF1BP20333 461 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 BUD31P41223 144 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 BNC1Q01954 994 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 GRSF1Q12849 480 aaKnown RBP eCLIP10.23□□□□□ -0.77
USB1-212ENST00000566082 CCL14Q16627 93 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 UPP1Q16831 310 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 FBXO43Q4G163 708 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 C10orf62Q5T681 223 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 LCN1P1Q5VSP4 162 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 BEND5Q7L4P6 421 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 RNF180Q86T96 592 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 C1orf52Q8N6N3 182 aaKnown RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 OR2T11Q8NH01 316 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 XAGE5Q8WWM1 108 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 ZNF486Q96H40 463 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 C1orf74Q96LT6 269 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 ZNF583Q96ND8 569 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 MGLLQ99685 303 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
USB1-212ENST00000566082 ZNF385DQ9H6B1 395 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 TBC1D17Q9HA65 648 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SEMA3GQ9NS98 782 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SEC14L3Q9UDX4 400 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 OR6C75A6NL08 312 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SLC28A2O43868 658 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SLITRK5O94991 958 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 CDRT1O95170 752 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 PIM1P11309 404 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 RCVRNP35243 200 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 NSG1P42857 185 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 MANFP55145 182 aaKnown RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 DPY19L1Q2PZI1 675 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 KLHL12Q53G59 568 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 UBXN11Q5T124 520 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 DCST1Q5T197 706 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SCD5Q86SK9 330 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 FAM217AQ8IXS0 508 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 ASZ1Q8WWH4 475 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 MUL1Q969V5 352 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SUSD3Q96L08 255 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 PSKH2Q96QS6 385 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 TRIT1Q9H3H1 467 aaKnown RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 ARNT2Q9HBZ2 717 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 NKIRAS2Q9NYR9 191 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 DNAJC27Q9NZQ0 273 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 SCML2Q9UQR0 700 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 MYO10Q9HD67 2058 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 A6NL46 340 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 M0R129 80 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 KPNA3O00505 521 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 PDYNP01213 254 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 GKP32189 559 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 CD300CQ08708 224 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 UAP1L1Q3KQV9 507 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 TNFAIP8L2Q6P589 184 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 PRSS48Q7RTY5 328 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 BTLAQ7Z6A9 289 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 TSPYL5Q86VY4 417 aaPredicted RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 OR4K1Q8NGD4 311 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 RHOXF1Q8NHV9 184 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 FUBP3Q96I24 572 aaKnown RBP eCLIP10.23□□□□□ -0.77
USB1-212ENST00000566082 BBS4Q96RK4 519 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 OR51E2Q9H255 320 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 ANKHQ9HCJ1 492 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 DCAF13Q9NV06 445 aaKnown RBP10.23□□□□□ -0.77
USB1-212ENST00000566082 IL37Q9NZH6 218 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 ING4Q9UNL4 249 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 CLCA2Q9UQC9 943 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 POFUT2Q9Y2G5 429 aa10.23□□□□□ -0.77
USB1-212ENST00000566082 LOXHD1Q8IVV2 1947 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 SLC30A4O14863 429 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 NUAK1O60285 661 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 RPLP2P05387 115 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 CD72P21854 359 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 EPHB3P54753 998 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 ZXDBP98169 803 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 SMU1Q2TAY7 513 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 ADPRMQ3LIE5 342 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 MZT2AQ6P582 158 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 AQP11Q8NBQ7 271 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 PAPD5Q8NDF8 572 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 C9orf43Q8TAL5 461 aaPredicted RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 CD200R1Q8TD46 325 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 PEX13Q92968 403 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 NEURL2Q9BR09 285 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 ANKRA2Q9H9E1 313 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 DNAJC25-GNG10A0A024R161 153 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 I6L893 689 aaPredicted RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 WNT9AO14904 365 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms