RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 TUBA3EQ6PEY2 450 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 SPATC1Q76KD6 591 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PROSER1Q86XN7 944 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 OR8H3Q8N146 312 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ZNF540Q8NDQ6 660 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ENKURQ8TC29 256 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 AURKBQ96GD4 344 aaPredicted RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 GPR21Q99679 349 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 C2orf49Q9BVC5 232 aaPredicted RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 ZNF334Q9HCZ1 680 aaPredicted RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.86□□□□□ -0.991e-6■■■■□ 24.1
TOP1-201ENST00000361337 UNC80Q8N2C7 3258 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 CACNA1EQ15878 2313 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 LOC110117498-PIK3R3F6TDL0 507 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 KERAO60938 352 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 MTX2O75431 263 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 KATNA1O75449 491 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ZNF682O95780 498 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 POLR2EP19388 210 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 ATP6AP1LQ52LC2 224 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 TMEM240Q5SV17 173 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 AGAP7PQ5VUJ5 663 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 FAM151BQ6UXP7 276 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 PLEKHG7Q6ZR37 379 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 WBP2Q969T9 261 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 RHBDF1Q96CC6 855 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 MYEOVQ96EZ4 313 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 C8orf48Q96LL4 319 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 KCNS3Q9BQ31 491 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 PSD2Q9BQI7 771 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 AARSD1Q9BTE6 412 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 TMEFF2Q9UIK5 374 aaPredicted RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 CCL26Q9Y258 94 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 POLR3HQ9Y535 204 aaPredicted RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 AHCTF1Q8WYP5 2266 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 GPR179Q6PRD1 2367 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 NINQ8N4C6 2090 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 FAM234BA2RU67 622 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 IQCF5A8MTL0 148 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ZNF99A8MXY4 864 aaPredicted RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 FAM25AB3EWG3 89 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 FAM25CB3EWG5 89 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 FAM25GB3EWG6 89 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 PRMT5O14744 637 aaPredicted RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 SPNP16150 400 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 CD72P21854 359 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 KRT20P35900 424 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ERVK-8P63133 956 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 GPNMBQ14956 572 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ADGRF1Q5T601 910 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ANKRD33Q7Z3H0 272 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 SPATA19Q7Z5L4 167 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 AMIGO1Q86WK6 493 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 TMEM25Q86YD3 366 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ARMC8Q8IUR7 673 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ATG16L2Q8NAA4 619 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 SIDT2Q8NBJ9 832 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 LEMD2Q8NC56 503 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 OR4K2Q8NGD2 314 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 MCOLN3Q8TDD5 553 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 UTP15Q8TED0 518 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 KIAA1191Q96A73 305 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 MUC13Q9H3R2 512 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 TFB2MQ9H5Q4 396 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 ELAC1Q9H777 363 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 BRD9Q9H8M2 597 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 CSNK1G1Q9HCP0 422 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.85□□□□□ -0.99
TOP1-201ENST00000361337 ADGRE2Q9UHX3 823 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 MAGEL2Q9UJ55 1249 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 SLC25A13Q9UJS0 675 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 TLR6Q9Y2C9 796 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 YARS2Q9Y2Z4 477 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 PIPSLA2A3N6 862 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 C2orf81A6NN90 581 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 FGF10O15520 208 aaPredicted RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 GABARAPO95166 117 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 SLC26A3P40879 764 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 SUOXP51687 545 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 FAM189BP81408 668 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 PRKG2Q13237 762 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 CDK5R2Q13319 367 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 IL18R1Q13478 541 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 BOP1Q14137 746 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 Q6ZVU0 165 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 BEND5Q7L4P6 421 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 B3GNT8Q7Z7M8 397 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 RHEBL1Q8TAI7 183 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ATL1Q8WXF7 558 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 TMEM175Q9BSA9 504 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 ACTR8Q9H981 624 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 TDP1Q9NUW8 608 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 SLC25A37Q9NYZ2 338 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 MALT1Q9UDY8 824 aa8.85□□□□□ -0.99
TOP1-201ENST00000361337 INTS6Q9UL03 887 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 NDRG2Q9UN36 371 aaKnown RBP8.85□□□□□ -0.99
TOP1-201ENST00000361337 TTC34A8MYJ7 566 aa8.84□□□□□ -0.99
TOP1-201ENST00000361337 PLOD3O60568 738 aa8.84□□□□□ -0.99
TOP1-201ENST00000361337 NIPSNAP2O75323 286 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms