RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 MID2Q9UJV3 735 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 RAB21Q9UL25 225 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 PLCL2Q9UPR0 1127 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 ERVW-1Q9UQF0 538 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 AAR2Q9Y312 384 aaKnown RBP4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 DHRS7Q9Y394 339 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 RIPK3Q9Y572 518 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 PCDHAC2Q9Y5I4 1007 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 SNX13Q9Y5W8 968 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 PSAT1Q9Y617 370 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 FKBP7Q9Y680 259 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 CNTNAP2Q9UHC6 1331 aa4.61□□□□□ -1.67
HMGB3P9-201ENST00000441799 IFT172Q9UG01 1749 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TRBV23-1A0A0A0MS06 115 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 A0A0U1RQS6 177 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 ILVBLA1L0T0 632 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 DRGXA6NNA5 263 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 A8MXQ7 604 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 E7ESA3 106 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 H7C4K7 107 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 QSOX1O00391 747 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 NR5A2O00482 541 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 NUPL2O15504 423 aaKnown RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 ARHGEF9O43307 516 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CCDC22O60826 627 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 OPHN1O60890 802 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 MITFO75030 526 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 FAM155BO75949 473 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 UBXN7O94888 489 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 UNC5CO95185 931 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 C22orf31O95567 290 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 LDOC1O95751 146 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TGFAP01135 160 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 SOD2P04179 222 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 IFNA6P05013 189 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CRHP06850 196 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PGK2P07205 417 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 MMP2P08253 660 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 HNRNPA1P09651 372 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 JMJD7P0C870 316 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 RNF224P0DH78 156 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 MCF2P10911 925 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 RAB3AP20336 220 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CCNOP22674 350 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 WARSP23381 471 aaKnown RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 S100PP25815 95 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CD40LGP29965 261 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 HIBADHP31937 336 aaKnown RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CRHR1P34998 444 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 IGFALSP35858 605 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 RPS19P39019 145 aaKnown RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 ADCYAP1R1P41586 468 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PAFAH1B1P43034 410 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CDC34P49427 236 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 LIG4P49917 911 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 MEOX2P50222 304 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 RAB13P51153 203 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PGDP52209 483 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CAPZA1P52907 286 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 SOX10P56693 466 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 HERVK_113P62684 666 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CSNK1G2P78368 415 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 IL13RA1P78552 427 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 IFITM2Q01629 132 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 ALDH6A1Q02252 535 aaKnown RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PPP3CAQ08209 521 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 DSC1Q08554 894 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TEFQ10587 303 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 OVGP1Q12889 678 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 RESTQ13127 1097 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TSTA3Q13630 321 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PTK6Q13882 451 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TUBB2AQ13885 445 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 LARS2Q15031 903 aaKnown RBP4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 SHBQ15464 509 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 CA9Q16790 459 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TRIM16LQ309B1 348 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 USP41Q3LFD5 358 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 GXYLT1Q4G148 440 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TIGD2Q4W5G0 525 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 MPPE1Q53F39 396 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 HIKESHIQ53FT3 197 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 KLHL12Q53G59 568 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 AGBL2Q5U5Z8 902 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 BSPRYQ5W0U4 402 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 ATG16L1Q676U5 607 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 JADE1Q6IE81 842 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PMF1Q6P1K2 205 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 MSANTD2Q6P1R3 559 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 ZFP1Q6P2D0 407 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 NFRKBQ6P4R8 1299 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TMEM71Q6P5X7 295 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 BHLHB9Q6PI77 547 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PLEKHG7Q6ZR37 379 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 TRILQ7L0X0 811 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 NDUFAF7Q7L592 441 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 PLPPR4Q7Z2D5 763 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 KANSL1Q7Z3B3 1105 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 HORMAD1Q86X24 394 aa4.6□□□□□ -1.67
HMGB3P9-201ENST00000441799 FOXRED2Q8IWF2 684 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms