RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CPSF4LA6NMK7 179 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 LOC730098B7Z3J9 87 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 SSNA1O43805 119 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 RHOCP08134 193 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 CD1DP15813 335 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 DNAJB2P25686 324 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 GSTM2P28161 218 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PNPLA4P41247 253 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 CASP3P42574 277 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PPP5CP53041 499 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 COX10Q12887 443 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 SLAMF1Q13291 335 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 TOP3AQ13472 1001 aaPredicted RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 ZMAT1Q5H9K5 638 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ATAD3CQ5T2N8 411 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 LCN8Q6JVE9 175 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 ALDH16A1Q8IZ83 802 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PARP16Q8N5Y8 322 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 BOLLQ8N9W6 283 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 OR5K1Q8NHB7 308 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 RNF208Q9H0X6 261 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 MRPL39Q9NYK5 338 aaKnown RBP8.59□□□□□ -1.03
RTN4-206ENST00000394611 ANKMY1Q9P2S6 941 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
RTN4-206ENST00000394611 TYW5A2RUC4 315 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 DPYSL4O14531 572 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 INPPL1O15357 1258 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 SULT1C4O75897 302 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ALPLP05186 524 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 TYMPP19971 482 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 OXA1LQ15070 435 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 HIST2H2ACQ16777 129 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 UGT3A2Q3SY77 523 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 NXNL2Q5VZ03 156 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 OR2T5Q6IEZ7 315 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 PSAPL1Q6NUJ1 521 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 BHLHB9Q6PI77 547 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 DPY19L3Q6ZPD9 716 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CEP68Q76N32 757 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 TMEM179BQ7Z7N9 219 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CLECL1Q8IZS7 167 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 PACRGLQ8N7B6 248 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 OR9Q2Q8NGE9 314 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 OR2T11Q8NH01 316 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 OR2T29Q8NH02 315 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ZNF675Q8TD23 568 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 SH3KBP1Q96B97 665 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CDKN2AIPNLQ96HQ2 116 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 IKZF5Q9H5V7 419 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ARMC1Q9NVT9 282 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 MS4A12Q9NXJ0 267 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 TVP23BQ9NYZ1 205 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 TMCC3Q9ULS5 477 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 N6AMT1Q9Y5N5 214 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 FAM234BA2RU67 622 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ANKDD1BA6NHY2 528 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 OR2AG2A6NM03 316 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 I6L893 689 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 DUSP11O75319 330 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 MMP3P08254 477 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CCL5P13501 91 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ENGP17813 658 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 HRH2P25021 359 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 KRT20P35900 424 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 LIPAP38571 399 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 KIR3DL1P43629 444 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 GNG2P59768 71 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ERVPABLB-1P60509 514 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 C1DQ13901 141 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 USP41Q3LFD5 358 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CRTC2Q53ET0 693 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 TNFAIP8L2Q6P589 184 aaPredicted RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 ERICH5Q6P6B1 374 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CXCL17Q6UXB2 119 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 B3GNT8Q7Z7M8 397 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 LUZP2Q86TE4 346 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 TICAM1Q8IUC6 712 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 CELF5Q8N6W0 485 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 GPR151Q8TDV0 419 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 MYDGFQ969H8 173 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 DEFB118Q96PH6 123 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.58□□□□□ -1.044e-7■■■■■ 30.7
RTN4-206ENST00000394611 C1orf109Q9NX04 203 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 PCDHGB6Q9Y5F9 930 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 WDR81Q562E7 1941 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 POM121CA8CG34 1229 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 FXYD1O00168 92 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 NUAK1O60285 661 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 UPK1BO75841 260 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ODC1P11926 461 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 ACADVLP49748 655 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 RPS26P62854 115 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 ELP6Q0PNE2 266 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 HNRNPA0Q13151 305 aaKnown RBP8.58□□□□□ -1.04
RTN4-206ENST00000394611 FLYWCH1Q4VC44 716 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 SYTL3Q4VX76 610 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 LHX8Q68G74 356 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 DCLRE1AQ6PJP8 1040 aa8.58□□□□□ -1.04
RTN4-206ENST00000394611 LYPD8Q6UX82 237 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms