RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 C6orf203Q9P0P8 240 aaPredicted RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 TAAR2Q9P1P5 351 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 FBXO4Q9UKT5 387 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 SH2B3Q9UQQ2 575 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 TDRKHQ9Y2W6 561 aaKnown RBP14.21□□□□□ -0.13
CXCL12-201ENST00000343575 LAMA1P25391 3075 aa14.21□□□□□ -0.13
CXCL12-201ENST00000343575 PRR5-ARHGAP8B1AHC4 643 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 BCAT2O15382 392 aaPredicted RBP14.21□□□□□ -0.14
CXCL12-201ENST00000343575 F3P13726 295 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 JUNDP17535 347 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 SLC19A1P41440 591 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 HK2P52789 917 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 PNLIPRP1P54315 467 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 PKNOX1P55347 436 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 TBPL1P62380 186 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 BNC1Q01954 994 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 ILF3Q12906 894 aaKnown RBP eCLIP14.21□□□□□ -0.14
CXCL12-201ENST00000343575 WDR45BQ5MNZ6 344 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 SUSD1Q6UWL2 747 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 CDYL2Q8N8U2 506 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 LINC01555Q8NAE3 123 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 MAELQ96JY0 434 aaKnown RBP14.21□□□□□ -0.14
CXCL12-201ENST00000343575 C3orf30Q96M34 536 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 DNAJC11Q9NVH1 559 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 VTI1BQ9UEU0 232 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 RNF11Q9Y3C5 154 aa14.21□□□□□ -0.14
CXCL12-201ENST00000343575 CACNA1EQ15878 2313 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 VPS13AQ96RL7 3174 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 TRBV23OR9-2A0A075B6M9 112 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 KCNE1BA0A087WTH5 132 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 A0A1B0GVG6 124 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 A0A1W2PPV9 198 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 ARHGAP10A1A4S6 786 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
CXCL12-201ENST00000343575 SDHDO14521 159 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 KATNA1O75449 491 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 OTCP00480 354 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 NPPBP16860 134 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 CD22P20273 847 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 EPHA3P29320 983 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 AVPR2P30518 371 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 HSPA13P48723 471 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 INHBCP55103 352 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 YBX1P67809 324 aaKnown RBP14.2□□□□□ -0.14
CXCL12-201ENST00000343575 PCDH1Q08174 1060 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 CYP2A13Q16696 494 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 PRRT3Q5FWE3 981 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 IYDQ6PHW0 289 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 SYTL1Q8IYJ3 562 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 C2orf73Q8N5S3 287 aaPredicted RBP14.2□□□□□ -0.14
CXCL12-201ENST00000343575 MED8Q96G25 268 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 MVB12BQ9H7P6 319 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 MEAF6Q9HAF1 191 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 APOBEC3BQ9UH17 382 aaKnown RBP14.2□□□□□ -0.14
CXCL12-201ENST00000343575 PCM1Q15154 2024 aa14.2□□□□□ -0.14
CXCL12-201ENST00000343575 PI4KAP42356 2102 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 TP53BP1Q12888 1972 aaPredicted RBP14.19□□□□□ -0.14
CXCL12-201ENST00000343575 GOLGA8QA0A0J9YX86 632 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 GOLGA8OA6NCC3 632 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 GOLGA8NF8WBI6 632 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 SLCO1B7G3V0H7 640 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 RPN2P04844 631 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 CAPN1P07384 714 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 DHPSP49366 369 aaPredicted RBP14.19□□□□□ -0.14
CXCL12-201ENST00000343575 BLKP51451 505 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 LYSMD4Q5XG99 296 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 BORAQ6PGQ7 559 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 UGT2A3Q6UWM9 527 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 MILR1Q7Z6M3 343 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 NAGSQ8N159 534 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 OR52E1Q8NGJ3 308 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 FBXO27Q8NI29 283 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 SLC26A7Q8TE54 656 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 TWIST2Q8WVJ9 160 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 CLPTM1LQ96KA5 538 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 CATSPER2Q96P56 530 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 GSDMCQ9BYG8 508 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 MRPS26Q9BYN8 205 aaKnown RBP14.19□□□□□ -0.14
CXCL12-201ENST00000343575 XKR8Q9H6D3 395 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 RAB26Q9ULW5 256 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 PADI4Q9UM07 663 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 ANGPTL3Q9Y5C1 460 aa14.19□□□□□ -0.14
CXCL12-201ENST00000343575 EBLN1P0CF75 366 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 UROSP10746 265 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 HTR6P50406 440 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 AFF3P51826 1226 aaKnown RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 E2F2Q14209 437 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 ARHGAP19Q14CB8 494 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 LSM12Q3MHD2 195 aaKnown RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 SFT2D3Q587I9 215 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 OGFRL1Q5TC84 451 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-201ENST00000343575 TAF8Q7Z7C8 310 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 SNX31Q8N9S9 440 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 L3MBTL4Q8NA19 623 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 NEIL2Q969S2 332 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 ATP6V1E2Q96A05 226 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 FAR2Q96K12 515 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 C11orf16Q9NQ32 467 aa14.18□□□□□ -0.14
CXCL12-201ENST00000343575 PILRBQ9UKJ0 227 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms