RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 DNAJB5O75953 348 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 ALDH1A1P00352 501 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 C9P02748 559 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 DDX5P17844 614 aaKnown RBP10.27□□□□□ -0.76
USB1-212ENST00000566082 PPIBP23284 216 aaKnown RBP10.27□□□□□ -0.76
USB1-212ENST00000566082 ARNTP27540 789 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 UGT2B15P54855 530 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 RAB25P57735 213 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 GABARAPL2P60520 117 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 CSNK2BP67870 215 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 SERINC3Q13530 473 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 USP45Q70EL2 814 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 CYP2U1Q7Z449 544 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 DCP2Q8IU60 420 aaKnown RBP10.27□□□□□ -0.76
USB1-212ENST00000566082 UMODL1-AS1Q8N2C9 162 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 NETO1Q8TDF5 533 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 TRNT1Q96Q11 434 aaKnown RBP10.27□□□□□ -0.76
USB1-212ENST00000566082 PHOX2BQ99453 314 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 ACAT2Q9BWD1 397 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 TNKS2Q9H2K2 1166 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 POPDC3Q9HBV1 291 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 ING3Q9NXR8 418 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 ADAM30Q9UKF2 790 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 INTS6Q9UL03 887 aaKnown RBP10.27□□□□□ -0.76
USB1-212ENST00000566082 CORO2BQ9UQ03 480 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 NME7Q9Y5B8 376 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 LYVE1Q9Y5Y7 322 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 ACTL7AQ9Y615 435 aa10.27□□□□□ -0.76
USB1-212ENST00000566082 FABP12A6NFH5 140 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 OR6C70A6NIJ9 312 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 MANBAO00462 879 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 CPNE3O75131 537 aaKnown RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 SNAI1O95863 264 aaPredicted RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 IDUAP35475 653 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 ZBTB6Q15916 424 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 C9orf131Q5VYM1 1079 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 OR10T2Q8NGX3 314 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 KCNJ9Q92806 393 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 PPCDCQ96CD2 204 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 ATOH8Q96SQ7 321 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 DPH2Q9BQC3 489 aaPredicted RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 CORO1BQ9BR76 489 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 DUSP26Q9BV47 211 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 TM9SF3Q9HD45 589 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 GKN1Q9NS71 199 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 TBC1D14Q9P2M4 693 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 ZNF222Q9UK12 451 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 FZD4Q9ULV1 537 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 FADS2P1A8MWK0 482 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 GJB3O75712 270 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 STSP08842 583 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 BCKDHAP12694 445 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 OR1E2P47887 323 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 ATN1P54259 1190 aaPredicted RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 MTA1Q13330 715 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 CYP27C1Q4G0S4 372 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 IFI44LQ53G44 452 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 LRRC73Q5JTD7 316 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.27□□□□□ -0.77
USB1-212ENST00000566082 ANXA8L1Q5VT79 327 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 SMIM14Q96QK8 99 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 EMILIN2Q9BXX0 1053 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 IRF2BPLQ9H1B7 796 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 CLEC4MQ9H2X3 399 aaPredicted RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 GPN2Q9H9Y4 310 aaPredicted RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 TMEM248Q9NWD8 314 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 COMMD3Q9UBI1 195 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 SNX7Q9UNH6 387 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 PRKAB1Q9Y478 270 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 KCNE2Q9Y6J6 123 aa10.27□□□□□ -0.77
USB1-212ENST00000566082 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.27□□□□□ -0.77
USB1-212ENST00000566082 EVPLQ92817 2033 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 LDB2O43679 373 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 GPR32O75388 356 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 GADD45GO95257 159 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 GADD45AP24522 165 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 ST3GAL4Q11206 333 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 IL18Q14116 193 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 UBE2UQ5VVX9 321 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 MBOAT1Q6ZNC8 495 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 PLEKHM3Q6ZWE6 761 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TMPRSS11BQ86T26 416 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 Q8N9G6 341 aaPredicted RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 HJURPQ8NCD3 748 aaPredicted RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 ZNF675Q8TD23 568 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 MRPS31Q92665 395 aaKnown RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 PGAP3Q96FM1 320 aaPredicted RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 CAMKK2Q96RR4 588 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 SLC30A2Q9BRI3 323 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TMEM246Q9BRR3 403 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 OSBPL10Q9BXB5 764 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 ZBTB20Q9HC78 741 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms