RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 DOCK2Q92608 1830 aa4.34□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRP6O75581 1613 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 ATRNO75882 1429 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 ABCB11O95342 1321 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 A0A1W2PR77 199 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 FAM90A10PA6NDY2 464 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MYMKA6NI61 221 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 CD8B2A6NJW9 211 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 GLOD5A6NK44 160 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 PGRMC1O00264 195 aaKnown RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 ADAM20O43506 726 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 KCNJ13O60928 360 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 OAZ2O95190 189 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 NUDT17P0C025 328 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 VDRP11473 427 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MMP9P14780 707 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 CYP11B2P19099 503 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 LMO1P25800 156 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 HSD17B3P37058 310 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MTTPP55157 894 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAGOHP61326 146 aaKnown RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 CRYZQ08257 329 aaKnown RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 TEFQ10587 303 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 GRSF1Q12849 480 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 DECR1Q16698 335 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 CFAP157Q5JU67 520 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 KRT79Q5XKE5 535 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SLC30A6Q6NXT4 461 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 NCCRP1Q6ZVX7 275 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MARK2Q7KZI7 788 aaKnown RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MCM10Q7L590 875 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 FJX1Q86VR8 437 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 VSIG1Q86XK7 387 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SCYL3Q8IZE3 742 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SYCE1Q8N0S2 351 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 BEST3Q8N1M1 668 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPATA20Q8TB22 786 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 ATP8B4Q8TF62 1192 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 RND1Q92730 232 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 CASP10Q92851 521 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 MAGOHBQ96A72 148 aaKnown RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 GRAMD2BQ96HH9 432 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 AGAP3Q96P47 875 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM237Q96Q45 408 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 FMO2Q99518 471 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF184Q99676 751 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPZ1Q9BXG8 430 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPRY4Q9C004 299 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 NHEJ1Q9H9Q4 299 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SEBOXQ9HB31 216 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 PARVBQ9HBI1 364 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 SAMSN1Q9NSI8 373 aaKnown RBP4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 RHBDL2Q9NX52 303 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 TAB2Q9NYJ8 693 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 ADAM22Q9P0K1 906 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 TUBGCP4Q9UGJ1 667 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 PADI1Q9ULC6 663 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 LRRC42Q9Y546 428 aa4.33□□□□□ -1.72
HMGB1P16-201ENST00000447155 BCORQ6W2J9 1755 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NUP188Q5SRE5 1749 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TRPM3Q9HCF6 1732 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TECPR2O15040 1411 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 RTL9Q8NET4 1388 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 UMODL1Q5DID0 1318 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 LNP1A1A4G5 178 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 EIF4E1BA6NMX2 242 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMEM110-MUSTN1A8MSY1 372 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 A8MXQ7 604 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 E7EWF7 191 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SPECC1L-ADORA2AF8WAN1 911 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SOCS6O14544 535 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 POLR2DO15514 142 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CYTH3O43739 400 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SNX3O60493 162 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 AVILO75366 819 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CIB2O75838 187 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CTDNEP1O95476 244 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 GAS8O95995 478 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 OAS1P00973 400 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 DNTTP04053 509 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 IGHV4-30-4P0DP06 118 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SRCP12931 536 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 S100A1P23297 94 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ANXA13P27216 316 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 TMOD1P28289 359 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PCYT1AP49585 367 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 PEX5P50542 639 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SUOXP51687 545 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CLCNKAP51800 687 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ARPC4P59998 168 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 RPL26P61254 145 aaKnown RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 HPCAP84074 193 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CDR2Q01850 454 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 BNIP1Q12981 228 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 CDC16Q13042 620 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 BAATQ14032 418 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 NONOQ15233 471 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ATP13A5Q4VNC0 1218 aa4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 ZNF658Q5TYW1 1059 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P16-201ENST00000447155 SFMBT2Q5VUG0 894 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms