RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 FCGR1BQ92637 280 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 GTF2H4Q92759 462 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 SDHCQ99643 169 aaPredicted RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 SLA2Q9H6Q3 261 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 RASSF1Q9NS23 344 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 WDR70Q9NW82 654 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 SLC25A37Q9NYZ2 338 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 MKLN1Q9UL63 735 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 PEX16Q9Y5Y5 336 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 LOC105371267A0A1B0GV96 52 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 NPEPPSL1A6NEC2 478 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 CAPN5O15484 640 aaPredicted RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 ICMTO60725 284 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 ACLYP53396 1101 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 LILRA4P59901 499 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 IHHQ14623 411 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 PTPRCAPQ14761 206 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 BCL7AQ4VC05 210 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 KDM4DQ6B0I6 523 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 TWF2Q6IBS0 349 aaKnown RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 SIX5Q8N196 739 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 OR10Q1Q8NGQ4 319 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 NETO1Q8TDF5 533 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 UBE2FQ969M7 185 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 CDK15Q96Q40 435 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 NT5MQ9NPB1 228 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 OSER1Q9NX31 292 aa17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 PAQR5Q9NXK6 330 aaPredicted RBP17.29■□□□□ 0.36
CDKN1B-201ENST00000228872 WBP4O75554 376 aaKnown RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 HOXC13P31276 330 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 GRK5P34947 590 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 ITKQ08881 620 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 GPR50Q13585 617 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 CCDC71Q8IV32 467 aaPredicted RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 PSD4Q8NDX1 1056 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 KBTBD8Q8NFY9 601 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 EGLN2Q96KS0 407 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 HBEGFQ99075 208 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 GDF15Q99988 308 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 TTYH2Q9BSA4 534 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 RNF167Q9H6Y7 350 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 CATSPERBQ9H7T0 1116 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 SYTL2Q9HCH5 934 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 GRIP1Q9Y3R0 1128 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 ASB1Q9Y576 335 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 A0A0U1RQS6 177 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 H3BQ06 376 aaPredicted RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 FGF10O15520 208 aaPredicted RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 KLK8O60259 260 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 SEC22BO75396 215 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 RHOBTB1O94844 696 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 DNTTP04053 509 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 EPHA2P29317 976 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 CYP2C18P33260 490 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 ETV6P41212 452 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 MAGEA11P43364 429 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 ERVPABLB-1P60509 514 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 HTRA3P83110 453 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 NR6A1Q15406 480 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 LRRC26Q2I0M4 334 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 SETMARQ53H47 684 aaPredicted RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 CEP78Q5JTW2 689 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 WDR45BQ5MNZ6 344 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 LHX8Q68G74 356 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 MRNIPQ6NTE8 343 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 SLC46A3Q7Z3Q1 461 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 TSPYL5Q86VY4 417 aaPredicted RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 PHACTR4Q8IZ21 702 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 GPR150Q8NGU9 434 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 PYURFQ96I23 114 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 IRF2BPLQ9H1B7 796 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 HMX1Q9NP08 348 aaPredicted RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 C14orf119Q9NWQ9 140 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 TBC1D24Q9ULP9 559 aa17.28■□□□□ 0.36
CDKN1B-201ENST00000228872 LOC110117498-PIK3R3F6TDL0 507 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 RECQL5O94762 991 aaPredicted RBP17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 MMP2P08253 660 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 IL1RNP18510 177 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 HOXA9P31269 272 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 DSC2Q02487 901 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 STARD3Q14849 445 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 TIGD6Q17RP2 521 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 TYSND1Q2T9J0 566 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 SOWAHCQ53LP3 525 aaPredicted RBP17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 AFMIDQ63HM1 303 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 NEK5Q6P3R8 708 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 ZDHHC21Q8IVQ6 265 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 OR52B6Q8NGF0 335 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 PIK3R3Q92569 461 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 TRIM63Q969Q1 353 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 MYOCQ99972 504 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 TAS2R9Q9NYW1 312 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
CDKN1B-201ENST00000228872 PNMA8CA0A1B0GUJ8 204 aa17.27■□□□□ 0.35
CDKN1B-201ENST00000228872 LCHNA4D1U4 455 aa17.27■□□□□ 0.35
CDKN1B-201ENST00000228872 HHLA1C9JL84 531 aa17.27■□□□□ 0.35
CDKN1B-201ENST00000228872 ERVH48-1M5A8F1 160 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms