RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	CDA2	Q06703	312 aa		4.36	□□□□□ -1.71
HAA1	YPR008W	RSC58	Q07979	502 aa		4.36	□□□□□ -1.71
HAA1	YPR008W	SPO21	Q12411	609 aa		4.36	□□□□□ -1.71
HAA1	YPR008W	AIM26	P32858	118 aa		4.36	□□□□□ -1.71
HAA1	YPR008W	ETP1	P38748	585 aa	Known RBP	4.36	□□□□□ -1.71
HAA1	YPR008W	EEB1	Q02891	456 aa		4.36	□□□□□ -1.71
HAA1	YPR008W	AOS1	Q06624	347 aa		4.36	□□□□□ -1.71
HAA1	YPR008W	GAS1	P22146	559 aa	Known RBP	4.35	□□□□□ -1.71
HAA1	YPR008W	ABZ1	P37254	787 aa	Predicted RBP	4.35	□□□□□ -1.71
HAA1	YPR008W	MPH1	P40562	993 aa		4.35	□□□□□ -1.71
HAA1	YPR008W	ECL1	P48235	211 aa		4.35	□□□□□ -1.71
HAA1	YPR008W	HOS3	Q02959	697 aa	Known RBP	4.35	□□□□□ -1.71
HAA1	YPR008W	TIF35	Q04067	274 aa	Known RBP	4.35	□□□□□ -1.71
HAA1	YPR008W	RTT10	Q08924	1013 aa		4.35	□□□□□ -1.71
HAA1	YPR008W	DBP5	P20449	482 aa	Known RBP	4.34	□□□□□ -1.71
HAA1	YPR008W	SRO9	P25567	434 aa	Known RBP	4.34	□□□□□ -1.71
HAA1	YPR008W	IRC24	P40580	263 aa		4.34	□□□□□ -1.71
HAA1	YPR008W	CNN1	P43618	361 aa		4.34	□□□□□ -1.71
HAA1	YPR008W	ENT3	P47160	408 aa		4.34	□□□□□ -1.71
HAA1	YPR008W	CDC34	P14682	295 aa		4.34	□□□□□ -1.71
HAA1	YPR008W	RMD1	Q03441	430 aa		4.34	□□□□□ -1.71
HAA1	YPR008W	PET112	P33893	541 aa		4.33	□□□□□ -1.72
HAA1	YPR008W	YPL260W	Q08977	551 aa		4.33	□□□□□ -1.72
HAA1	YPR008W	DBP2	P24783	546 aa	Known RBP	4.33	□□□□□ -1.72
HAA1	YPR008W	RGD1	P38339	666 aa		4.33	□□□□□ -1.72
HAA1	YPR008W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
HAA1	YPR008W	YPL066W	Q12194	479 aa		4.33	□□□□□ -1.72
HAA1	YPR008W	HIR3	P47171	1648 aa		4.32	□□□□□ -1.72
HAA1	YPR008W	TRP2	P00899	507 aa	Known RBP	4.32	□□□□□ -1.72
HAA1	YPR008W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.32	□□□□□ -1.72	not detected
HAA1	YPR008W	TNA1	P53322	534 aa		4.32	□□□□□ -1.72
HAA1	YPR008W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.32	□□□□□ -1.72	not detected
HAA1	YPR008W	MOT2	P34909	587 aa	Known RBP	4.31	□□□□□ -1.72
HAA1	YPR008W	RPN3	P40016	523 aa	Known RBP	4.31	□□□□□ -1.72
HAA1	YPR008W	MXR1	P40029	184 aa		4.31	□□□□□ -1.72
HAA1	YPR008W	ESC2	Q06340	456 aa		4.31	□□□□□ -1.72
HAA1	YPR008W	THI80	P35202	319 aa		4.31	□□□□□ -1.72
HAA1	YPR008W	MET10	P39692	1035 aa		4.31	□□□□□ -1.72
HAA1	YPR008W	MRPL22	P53881	309 aa		4.31	□□□□□ -1.72
HAA1	YPR008W	COQ4	O13525	335 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	MCM7	P38132	845 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	NIT1	P40447	199 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	FAA4	P47912	694 aa	Known RBP	4.3	□□□□□ -1.72
HAA1	YPR008W	DNA2	P38859	1522 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	SPS1	P08458	490 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	RAD27	P26793	382 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	PIK1	P39104	1066 aa		4.3	□□□□□ -1.72
HAA1	YPR008W	XRN1	P22147	1528 aa	Known RBP	4.29	□□□□□ -1.72
HAA1	YPR008W	LYP1	P32487	611 aa		4.29	□□□□□ -1.72
HAA1	YPR008W	AIM3	P38266	947 aa	Known RBP	4.29	□□□□□ -1.72
HAA1	YPR008W	CCZ1	P38273	704 aa		4.29	□□□□□ -1.72
HAA1	YPR008W	UBP5	P39944	805 aa		4.29	□□□□□ -1.72
HAA1	YPR008W	TYW3	P53177	273 aa		4.29	□□□□□ -1.72
HAA1	YPR008W	YGR053C	P53234	283 aa		4.29	□□□□□ -1.72
HAA1	YPR008W	TMA46	Q12000	345 aa	Known RBP	4.29	□□□□□ -1.72
HAA1	YPR008W	RIB2	Q12362	591 aa	Known RBP	4.29	□□□□□ -1.72
HAA1	YPR008W	RPL11A	P0C0W9	174 aa	Known RBP	4.28	□□□□□ -1.72
HAA1	YPR008W	SRM1	P21827	482 aa		4.28	□□□□□ -1.72
HAA1	YPR008W	YLR225C	Q05948	407 aa	Known RBP	4.28	□□□□□ -1.72
HAA1	YPR008W	RPL11B	Q3E757	174 aa	Predicted RBP	4.28	□□□□□ -1.72
HAA1	YPR008W	INO1	P11986	533 aa		4.28	□□□□□ -1.72
HAA1	YPR008W	MNR2	P35724	969 aa		4.28	□□□□□ -1.72
HAA1	YPR008W	PRP43	P53131	767 aa	Known RBP	4.28	□□□□□ -1.72
HAA1	YPR008W	NBA1	Q08229	501 aa	Known RBP	4.28	□□□□□ -1.72
HAA1	YPR008W	KOG1	P38873	1557 aa		4.27	□□□□□ -1.73
HAA1	YPR008W	SIP5	P40210	489 aa	Known RBP	4.27	□□□□□ -1.73
HAA1	YPR008W	HNT2	P49775	206 aa		4.27	□□□□□ -1.73
HAA1	YPR008W	GNT1	Q12096	491 aa		4.27	□□□□□ -1.73
HAA1	YPR008W	CYC1	P00044	109 aa	Predicted RBP	4.26	□□□□□ -1.73
HAA1	YPR008W	PRP6	P19735	899 aa	Predicted RBP	4.26	□□□□□ -1.73
HAA1	YPR008W	BAS1	P22035	811 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	PNT1	P38969	423 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	SEC26	P41810	973 aa	Known RBP	4.26	□□□□□ -1.73
HAA1	YPR008W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
HAA1	YPR008W	GDE1	Q02979	1223 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	VPS16	Q03308	798 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	PLB2	Q03674	706 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	RSB1	Q08417	382 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	UGA2	P38067	497 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	TAF1	P46677	1066 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	JIP5	Q06214	492 aa	Predicted RBP	4.26	□□□□□ -1.73
HAA1	YPR008W	YPL277C	Q08989	487 aa		4.26	□□□□□ -1.73
HAA1	YPR008W	ABD1	P32783	436 aa	Predicted RBP	4.25	□□□□□ -1.73
HAA1	YPR008W	SLA2	P33338	968 aa		4.25	□□□□□ -1.73
HAA1	YPR008W	YGL176C	P46945	554 aa		4.25	□□□□□ -1.73
HAA1	YPR008W	FOL2	P51601	243 aa	Known RBP	4.25	□□□□□ -1.73
HAA1	YPR008W	PIN2	Q12057	282 aa		4.25	□□□□□ -1.73
HAA1	YPR008W	YKL069W	P36088	180 aa		4.25	□□□□□ -1.73
HAA1	YPR008W	SNO2	P53823	222 aa		4.25	□□□□□ -1.73
HAA1	YPR008W	SVS1	Q12254	260 aa		4.25	□□□□□ -1.73
HAA1	YPR008W	BI4	P03879	638 aa		4.24	□□□□□ -1.73
HAA1	YPR008W	ROT1	Q03691	256 aa		4.24	□□□□□ -1.73
HAA1	YPR008W	RPS13	P05756	151 aa	Known RBP	4.23	□□□□□ -1.73
HAA1	YPR008W	YKL151C	P36059	337 aa		4.23	□□□□□ -1.73
HAA1	YPR008W	RFC5	P38251	354 aa		4.23	□□□□□ -1.73
HAA1	YPR008W	YDR132C	Q03900	495 aa		4.23	□□□□□ -1.73
HAA1	YPR008W	ACE2	P21192	770 aa		4.23	□□□□□ -1.73
HAA1	YPR008W	TOD6	P34219	525 aa		4.23	□□□□□ -1.73
HAA1	YPR008W	MTC3	P53077	123 aa		4.23	□□□□□ -1.73
HAA1	YPR008W	SPP382	Q06411	708 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms