RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W PIB2P53191 635 aa6.13□□□□□ -1.43
SSO1YPL232W PNG1Q02890 363 aa6.13□□□□□ -1.43
SSO1YPL232W SPO71Q03868 1245 aa6.13□□□□□ -1.43
SSO1YPL232W MMR1Q06324 491 aa6.13□□□□□ -1.43
SSO1YPL232W CAN1P04817 590 aa6.12□□□□□ -1.43
SSO1YPL232W MYO3P36006 1272 aa6.12□□□□□ -1.43
SSO1YPL232W ECM21P38167 1117 aaKnown RBP6.12□□□□□ -1.43
SSO1YPL232W NDT80P38830 627 aa6.12□□□□□ -1.43
SSO1YPL232W MGA2P40578 1113 aa6.12□□□□□ -1.43
SSO1YPL232W YJL045WP47052 634 aa6.12□□□□□ -1.43
SSO1YPL232W YLR326WQ06170 240 aaKnown RBP6.12□□□□□ -1.43
SSO1YPL232W YLL058WQ12198 575 aa6.12□□□□□ -1.43
SSO1YPL232W BMT6Q12291 365 aa6.12□□□□□ -1.43
SSO1YPL232W RAD2P07276 1031 aa6.11□□□□□ -1.43
SSO1YPL232W RIT1P23796 513 aa6.11□□□□□ -1.43
SSO1YPL232W SUV3P32580 737 aa6.11□□□□□ -1.43
SSO1YPL232W SLX1P38324 304 aa6.11□□□□□ -1.43
SSO1YPL232W YTA12P40341 825 aa6.11□□□□□ -1.43
SSO1YPL232W FAF1P40546 346 aaPredicted RBP6.11□□□□□ -1.43
SSO1YPL232W UFD2P54860 961 aa6.11□□□□□ -1.43
SSO1YPL232W RPS15Q01855 142 aaKnown RBP6.11□□□□□ -1.43
SSO1YPL232W CUS1Q02554 436 aaPredicted RBP6.11□□□□□ -1.43
SSO1YPL232W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SSO1YPL232W PIG1Q06216 648 aa6.11□□□□□ -1.43
SSO1YPL232W MAG2Q06436 670 aaKnown RBP6.11□□□□□ -1.43
SSO1YPL232W YOL036WQ08206 761 aa6.11□□□□□ -1.43
SSO1YPL232W PRC1P00729 532 aa6.1□□□□□ -1.43
SSO1YPL232W RPL40AP0CH08 128 aaKnown RBP6.1□□□□□ -1.43
SSO1YPL232W RPL40BP0CH09 128 aaKnown RBP6.1□□□□□ -1.43
SSO1YPL232W IMG2P25642 146 aaPredicted RBP6.1□□□□□ -1.43
SSO1YPL232W UGA4P32837 571 aa6.1□□□□□ -1.43
SSO1YPL232W HXT5P38695 592 aa6.1□□□□□ -1.43
SSO1YPL232W FMS1P50264 508 aa6.1□□□□□ -1.43
SSO1YPL232W LSB1P53281 241 aa6.1□□□□□ -1.43
SSO1YPL232W RPL8BP29453 256 aaKnown RBP6.09□□□□□ -1.43
SSO1YPL232W MSS51P32335 436 aa6.09□□□□□ -1.43
SSO1YPL232W UBP15P50101 1230 aa6.09□□□□□ -1.43
SSO1YPL232W YLR455WQ06188 304 aa6.09□□□□□ -1.43
SSO1YPL232W CDC45Q08032 650 aa6.09□□□□□ -1.43
SSO1YPL232W SGO1Q08490 590 aa6.09□□□□□ -1.43
SSO1YPL232W CLF1Q12309 687 aaPredicted RBP6.09□□□□□ -1.43
SSO1YPL232W TIF1P10081 395 aaKnown RBP6.08□□□□□ -1.44
SSO1YPL232W SRP54P20424 541 aaKnown RBP6.08□□□□□ -1.44
SSO1YPL232W OPI1P21957 404 aa6.08□□□□□ -1.44
SSO1YPL232W COQ8P27697 501 aa6.08□□□□□ -1.44
SSO1YPL232W ANP1P32629 500 aa6.08□□□□□ -1.44
SSO1YPL232W MET1P36150 593 aa6.08□□□□□ -1.44
SSO1YPL232W APN2P38207 520 aa6.08□□□□□ -1.44
SSO1YPL232W BUD16P39988 312 aa6.08□□□□□ -1.44
SSO1YPL232W RPT6Q01939 405 aaKnown RBP6.08□□□□□ -1.44
SSO1YPL232W BEM2P39960 2167 aaKnown RBP6.08□□□□□ -1.44
SSO1YPL232W BET2P20133 325 aa6.07□□□□□ -1.44
SSO1YPL232W SEC20P28791 383 aa6.07□□□□□ -1.44
SSO1YPL232W RME1P32338 300 aaKnown RBP6.07□□□□□ -1.44
SSO1YPL232W RTG1P32607 177 aa6.07□□□□□ -1.44
SSO1YPL232W DRE2P36152 348 aa6.07□□□□□ -1.44
SSO1YPL232W KTR4P38131 464 aa6.07□□□□□ -1.44
SSO1YPL232W YFL052WP43551 465 aa6.07□□□□□ -1.44
SSO1YPL232W YRB30P53107 440 aaPredicted RBP6.07□□□□□ -1.44
SSO1YPL232W MRPS35P53292 345 aa6.07□□□□□ -1.44
SSO1YPL232W RVB2Q12464 471 aaKnown RBP6.07□□□□□ -1.44
SSO1YPL232W ACC1Q00955 2233 aaKnown RBP6.07□□□□□ -1.44
SSO1YPL232W VMA1P17255 1071 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W TVP38P36164 337 aa6.06□□□□□ -1.44
SSO1YPL232W RFS1P38234 210 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W SAF1P38352 637 aa6.06□□□□□ -1.44
SSO1YPL232W ARP1P38696 384 aa6.06□□□□□ -1.44
SSO1YPL232W APM2P38700 605 aa6.06□□□□□ -1.44
SSO1YPL232W HMF1P40037 129 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W PSP2P50109 593 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W MYO5Q04439 1219 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W HCR1Q05775 265 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W VIP1Q06685 1146 aaKnown RBP6.06□□□□□ -1.44
SSO1YPL232W KTR1P27810 393 aaKnown RBP6.05□□□□□ -1.44
SSO1YPL232W NMD2P38798 1089 aaKnown RBP6.05□□□□□ -1.44
SSO1YPL232W SAD1P43589 448 aa6.05□□□□□ -1.44
SSO1YPL232W GCV2P49095 1034 aa6.05□□□□□ -1.44
SSO1YPL232W BIO5P53744 561 aaKnown RBP6.05□□□□□ -1.44
SSO1YPL232W HDA1P53973 706 aa6.05□□□□□ -1.44
SSO1YPL232W MUK1Q02866 612 aa6.05□□□□□ -1.44
SSO1YPL232W MAK31P23059 88 aa6.04□□□□□ -1.44
SSO1YPL232W ADK2P26364 225 aa6.04□□□□□ -1.44
SSO1YPL232W YKL097CP34245 136 aa6.04□□□□□ -1.44
SSO1YPL232W STS1P38637 319 aa6.04□□□□□ -1.44
SSO1YPL232W MOB1P40484 314 aa6.04□□□□□ -1.44
SSO1YPL232W MDR1P53258 950 aa6.04□□□□□ -1.44
SSO1YPL232W MDM1Q01846 1127 aa6.04□□□□□ -1.44
SSO1YPL232W BRE1Q07457 700 aaKnown RBP6.04□□□□□ -1.44
SSO1YPL232W GPI13Q07830 1017 aa6.04□□□□□ -1.44
SSO1YPL232W LAA1P39526 2014 aa6.04□□□□□ -1.44
SSO1YPL232W UBC1P21734 215 aaKnown RBP6.03□□□□□ -1.44
SSO1YPL232W PUP3P25451 205 aaKnown RBP6.03□□□□□ -1.44
SSO1YPL232W CLB5P30283 435 aa6.03□□□□□ -1.44
SSO1YPL232W BUD2P33314 1104 aa6.03□□□□□ -1.44
SSO1YPL232W PAN5P38787 379 aa6.03□□□□□ -1.44
SSO1YPL232W YEL025CP39991 1188 aa6.03□□□□□ -1.44
SSO1YPL232W MMF1P40185 145 aaKnown RBP6.03□□□□□ -1.44
SSO1YPL232W CSM2P40465 213 aa6.03□□□□□ -1.44
SSO1YPL232W YNL035CP53962 389 aaKnown RBP6.03□□□□□ -1.44
SSO1YPL232W WHI4Q07655 649 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms