RNA–Protein interactions for RNA: YOR362C

PRE10, Transcript of Alpha 7 subunit of the 20S proteasome, yeastyeast

Gene PRE10, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE10YOR362C YLH47Q06493 454 aa8.66□□□□□ -1.02
PRE10YOR362C RKM4Q12504 494 aa8.66□□□□□ -1.02
PRE10YOR362C TIF6Q12522 245 aaKnown RBP8.66□□□□□ -1.02
PRE10YOR362C SMC6Q12749 1114 aa8.66□□□□□ -1.02
PRE10YOR362C GPA1P08539 472 aa8.65□□□□□ -1.02
PRE10YOR362C EUG1P32474 517 aa8.65□□□□□ -1.02
PRE10YOR362C IXR1P33417 597 aa8.65□□□□□ -1.02
PRE10YOR362C ASH1P34233 588 aa8.65□□□□□ -1.02
PRE10YOR362C MCR1P36060 302 aaKnown RBP8.65□□□□□ -1.02
PRE10YOR362C ISW1P38144 1129 aa8.65□□□□□ -1.02
PRE10YOR362C NDT80P38830 627 aa8.65□□□□□ -1.02
PRE10YOR362C GAA1P39012 614 aa8.65□□□□□ -1.02
PRE10YOR362C DAK2P43550 591 aa8.65□□□□□ -1.02
PRE10YOR362C YGR125WP53273 1036 aa8.65□□□□□ -1.02
PRE10YOR362C YGR273CP53329 174 aa8.65□□□□□ -1.02
PRE10YOR362C CNM67P53865 581 aaKnown RBP8.65□□□□□ -1.02
PRE10YOR362C KRE33P53914 1056 aaKnown RBP8.65□□□□□ -1.02
PRE10YOR362C AIM33Q04516 312 aa8.65□□□□□ -1.02
PRE10YOR362C MCM4P30665 933 aaKnown RBP8.64□□□□□ -1.03
PRE10YOR362C UTR4P32626 227 aa8.64□□□□□ -1.03
PRE10YOR362C NPR3P38742 1146 aa8.64□□□□□ -1.03
PRE10YOR362C ETP1P38748 585 aaKnown RBP8.64□□□□□ -1.03
PRE10YOR362C RRM3P38766 723 aa8.64□□□□□ -1.03
PRE10YOR362C ATG32P40458 529 aa8.64□□□□□ -1.03
PRE10YOR362C YGR153WP48238 217 aa8.64□□□□□ -1.03
PRE10YOR362C VMS1Q04311 632 aaKnown RBP8.64□□□□□ -1.03
PRE10YOR362C SGD1Q06132 899 aa8.64□□□□□ -1.03
PRE10YOR362C ARP6Q12509 438 aa8.64□□□□□ -1.03
PRE10YOR362C TRS33Q99394 268 aa8.64□□□□□ -1.03
PRE10YOR362C FOB1O13329 566 aa8.63□□□□□ -1.03
PRE10YOR362C ILV1P00927 576 aaKnown RBP8.63□□□□□ -1.03
PRE10YOR362C CKA2P19454 339 aa8.63□□□□□ -1.03
PRE10YOR362C SAC6P32599 642 aaKnown RBP8.63□□□□□ -1.03
PRE10YOR362C SEC8P32855 1065 aa8.63□□□□□ -1.03
PRE10YOR362C YGL015CP33199 130 aa8.63□□□□□ -1.03
PRE10YOR362C PGM1P33401 570 aaKnown RBP8.63□□□□□ -1.03
PRE10YOR362C ROG3P43602 733 aa8.63□□□□□ -1.03
PRE10YOR362C UBA2P52488 636 aa8.63□□□□□ -1.03
PRE10YOR362C CBK1P53894 756 aa8.63□□□□□ -1.03
PRE10YOR362C LCD1Q04377 747 aa8.63□□□□□ -1.03
PRE10YOR362C ISA1Q07821 250 aaPredicted RBP8.63□□□□□ -1.03
PRE10YOR362C PHR1P05066 565 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
PRE10YOR362C CDC15P27636 974 aa8.62□□□□□ -1.03
PRE10YOR362C MOT2P34909 587 aaKnown RBP8.62□□□□□ -1.03
PRE10YOR362C THI6P41835 540 aa8.62□□□□□ -1.03
PRE10YOR362C VTC2P43585 828 aa8.62□□□□□ -1.03
PRE10YOR362C ATG1P53104 897 aa8.62□□□□□ -1.03
PRE10YOR362C RSC1P53236 928 aa8.62□□□□□ -1.03
PRE10YOR362C ORC4P54791 529 aa8.62□□□□□ -1.03
PRE10YOR362C PTA1Q01329 785 aaPredicted RBP8.62□□□□□ -1.03
PRE10YOR362C DUS3Q06053 668 aaKnown RBP8.62□□□□□ -1.03
PRE10YOR362C PSR2Q07949 397 aa8.62□□□□□ -1.03
PRE10YOR362C CLB5P30283 435 aa8.61□□□□□ -1.03
PRE10YOR362C HIR1P32479 840 aa8.61□□□□□ -1.03
PRE10YOR362C SRP40P32583 406 aaPredicted RBP8.61□□□□□ -1.03
PRE10YOR362C SVF1Q05515 481 aa8.61□□□□□ -1.03
PRE10YOR362C PHM6Q05637 104 aa8.61□□□□□ -1.03
PRE10YOR362C PGK1P00560 416 aaKnown RBP8.6□□□□□ -1.03
PRE10YOR362C KNS1P32350 737 aaPredicted RBP8.6□□□□□ -1.03
PRE10YOR362C SHP1P34223 423 aa8.6□□□□□ -1.03
PRE10YOR362C RKM3P38222 552 aa8.6□□□□□ -1.03
PRE10YOR362C ZPR1P53303 486 aaKnown RBP8.6□□□□□ -1.03
PRE10YOR362C SLD5Q03406 294 aa8.6□□□□□ -1.03
PRE10YOR362C YLR225CQ05948 407 aaKnown RBP8.6□□□□□ -1.03
PRE10YOR362C YLR326WQ06170 240 aaKnown RBP8.6□□□□□ -1.03
PRE10YOR362C ERP3Q12403 225 aa8.6□□□□□ -1.03
PRE10YOR362C SRF1Q12516 437 aa8.6□□□□□ -1.03
PRE10YOR362C TKL1P23254 680 aaKnown RBP8.59□□□□□ -1.03
PRE10YOR362C GSY2P27472 705 aa8.59□□□□□ -1.03
PRE10YOR362C PET10P36139 283 aa8.59□□□□□ -1.03
PRE10YOR362C REG2P38232 338 aa8.59□□□□□ -1.03
PRE10YOR362C VPS29P38759 282 aa8.59□□□□□ -1.03
PRE10YOR362C NOC2P39744 710 aaKnown RBP8.59□□□□□ -1.03
PRE10YOR362C TFG2P41896 400 aaPredicted RBP8.59□□□□□ -1.03
PRE10YOR362C VPS53P47061 822 aa8.59□□□□□ -1.03
PRE10YOR362C HCR1Q05775 265 aaKnown RBP8.59□□□□□ -1.03
PRE10YOR362C ADY4Q05955 493 aa8.59□□□□□ -1.03
PRE10YOR362C CLN3P13365 580 aa8.58□□□□□ -1.04
PRE10YOR362C ATE1P16639 503 aa8.58□□□□□ -1.04
PRE10YOR362C RGT1P32862 1170 aa8.58□□□□□ -1.04
PRE10YOR362C TFC4P33339 1025 aa8.58□□□□□ -1.04
PRE10YOR362C SIP3P38717 1229 aa8.58□□□□□ -1.04
PRE10YOR362C MXR1P40029 184 aa8.58□□□□□ -1.04
PRE10YOR362C HMF1P40037 129 aaKnown RBP8.58□□□□□ -1.04
PRE10YOR362C NUP82P40368 713 aa8.58□□□□□ -1.04
PRE10YOR362C FYV10P40492 516 aa8.58□□□□□ -1.04
PRE10YOR362C GPD2P41911 440 aaKnown RBP8.58□□□□□ -1.04
PRE10YOR362C UBP15P50101 1230 aa8.58□□□□□ -1.04
PRE10YOR362C PGA2P53903 129 aa8.58□□□□□ -1.04
PRE10YOR362C SEC5P89102 971 aa8.58□□□□□ -1.04
PRE10YOR362C FUS2Q05670 677 aa8.58□□□□□ -1.04
PRE10YOR362C DUS4Q06063 367 aa8.58□□□□□ -1.04
PRE10YOR362C WHI4Q07655 649 aaKnown RBP8.58□□□□□ -1.04
PRE10YOR362C TLG2Q08144 397 aa8.58□□□□□ -1.04
PRE10YOR362C MET7Q08645 548 aa8.58□□□□□ -1.04
PRE10YOR362C MSC6Q08818 692 aaKnown RBP8.58□□□□□ -1.04
PRE10YOR362C SRD1P09007 221 aa8.57□□□□□ -1.04
PRE10YOR362C YEL076C-AP0CX16 216 aa8.57□□□□□ -1.04
PRE10YOR362C YLR464WP0CX17 216 aa8.57□□□□□ -1.04
PRE10YOR362C MIP1P15801 1254 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 58.6 ms