RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	KIP1	P28742	1111 aa		5.66	□□□□□ -1.5
YTM1	YOR272W	MPH1	P40562	993 aa		5.66	□□□□□ -1.5
YTM1	YOR272W	RCM1	P53972	490 aa		5.66	□□□□□ -1.5
YTM1	YOR272W	SSF2	Q12153	453 aa	Predicted RBP	5.66	□□□□□ -1.5
YTM1	YOR272W	NSI1	Q12457	570 aa		5.66	□□□□□ -1.5
YTM1	YOR272W	RKM4	Q12504	494 aa		5.66	□□□□□ -1.5
YTM1	YOR272W	GLT1	Q12680	2145 aa	Known RBP	5.65	□□□□□ -1.5
YTM1	YOR272W	BPT1	P14772	1559 aa		5.65	□□□□□ -1.5
YTM1	YOR272W	INO1	P11986	533 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	AGP1	P25376	633 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	MLS1	P30952	554 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	WHI3	P34761	661 aa	Known RBP	5.65	□□□□□ -1.51
YTM1	YOR272W	MCM7	P38132	845 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	YJL049W	P47048	450 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	EAR1	Q03212	550 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	AOS1	Q06624	347 aa		5.65	□□□□□ -1.51
YTM1	YOR272W	PRI2	P20457	528 aa		5.64	□□□□□ -1.51
YTM1	YOR272W	SBA1	P28707	216 aa	Known RBP	5.64	□□□□□ -1.51
YTM1	YOR272W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
YTM1	YOR272W	RPN3	P40016	523 aa	Known RBP	5.64	□□□□□ -1.51
YTM1	YOR272W	NOP2	P40991	618 aa	Known RBP	5.64	□□□□□ -1.51
YTM1	YOR272W	YJL045W	P47052	634 aa		5.64	□□□□□ -1.51
YTM1	YOR272W	YLR225C	Q05948	407 aa	Known RBP	5.64	□□□□□ -1.51
YTM1	YOR272W	GNT1	Q12096	491 aa		5.64	□□□□□ -1.51
YTM1	YOR272W	YVC1	Q12324	675 aa		5.64	□□□□□ -1.51
YTM1	YOR272W	SPO21	Q12411	609 aa		5.64	□□□□□ -1.51
YTM1	YOR272W	NMD3	P38861	518 aa	Known RBP	5.63	□□□□□ -1.51
YTM1	YOR272W	HOS3	Q02959	697 aa	Known RBP	5.63	□□□□□ -1.51
YTM1	YOR272W	SHE9	Q04172	456 aa		5.63	□□□□□ -1.51
YTM1	YOR272W	TDA5	Q06417	326 aa	Known RBP	5.63	□□□□□ -1.51
YTM1	YOR272W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	RIP-Chip
YTM1	YOR272W	YSC84	P32793	468 aa		5.62	□□□□□ -1.51
YTM1	YOR272W	YKL107W	P34251	309 aa		5.62	□□□□□ -1.51
YTM1	YOR272W	MOT2	P34909	587 aa	Known RBP	5.62	□□□□□ -1.51
YTM1	YOR272W	SPF1	P39986	1215 aa	Known RBP	5.62	□□□□□ -1.51
YTM1	YOR272W	YGR130C	P53278	816 aa		5.62	□□□□□ -1.51
YTM1	YOR272W	GRX1	P25373	110 aa	Known RBP	5.61	□□□□□ -1.51
YTM1	YOR272W	ABD1	P32783	436 aa	Predicted RBP	5.61	□□□□□ -1.51
YTM1	YOR272W	SEA4	P38164	1038 aa		5.61	□□□□□ -1.51
YTM1	YOR272W	YHL012W	P38709	493 aa		5.61	□□□□□ -1.51
YTM1	YOR272W	GPB2	P39717	880 aa		5.61	□□□□□ -1.51
YTM1	YOR272W	YGL176C	P46945	554 aa		5.61	□□□□□ -1.51
YTM1	YOR272W	TNA1	P53322	534 aa		5.61	□□□□□ -1.51
YTM1	YOR272W	ESP1	Q03018	1630 aa		5.61	□□□□□ -1.51
YTM1	YOR272W	COQ4	O13525	335 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	YER152C	P10356	443 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	SRO9	P25567	434 aa	Known RBP	5.6	□□□□□ -1.51
YTM1	YOR272W	MDL2	P33311	773 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	MRP8	P35719	219 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	YKL069W	P36088	180 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	OYE3	P41816	400 aa	Predicted RBP	5.6	□□□□□ -1.51
YTM1	YOR272W	SPP382	Q06411	708 aa	Predicted RBP	5.6	□□□□□ -1.51
YTM1	YOR272W	MED7	Q08278	222 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	TRE1	Q08919	783 aa		5.6	□□□□□ -1.51
YTM1	YOR272W	CYC7	P00045	113 aa		5.59	□□□□□ -1.51
YTM1	YOR272W	VBA5	P36172	582 aa		5.59	□□□□□ -1.51
YTM1	YOR272W	OCA5	P38738	679 aa		5.59	□□□□□ -1.51
YTM1	YOR272W	YPL066W	Q12194	479 aa		5.59	□□□□□ -1.51
YTM1	YOR272W	SAM35	P14693	329 aa		5.58	□□□□□ -1.52
YTM1	YOR272W	BAP2	P38084	609 aa		5.58	□□□□□ -1.52
YTM1	YOR272W	CCZ1	P38273	704 aa		5.58	□□□□□ -1.52
YTM1	YOR272W	PEX7	P39108	375 aa		5.58	□□□□□ -1.52
YTM1	YOR272W	IRR1	P40541	1150 aa		5.58	□□□□□ -1.52
YTM1	YOR272W	NAN1	Q02931	896 aa	Known RBP	5.58	□□□□□ -1.52
YTM1	YOR272W	ESC2	Q06340	456 aa		5.58	□□□□□ -1.52
YTM1	YOR272W	NBA1	Q08229	501 aa	Known RBP	5.58	□□□□□ -1.52
YTM1	YOR272W	MYO2	P19524	1574 aa	Known RBP	5.58	□□□□□ -1.52
YTM1	YOR272W	YCF1	P39109	1515 aa	Known RBP	5.57	□□□□□ -1.52
YTM1	YOR272W	TRP3	P00937	484 aa		5.57	□□□□□ -1.52
YTM1	YOR272W	PBY1	P38254	753 aa		5.57	□□□□□ -1.52
YTM1	YOR272W	YOL098C	Q12496	1037 aa		5.57	□□□□□ -1.52
YTM1	YOR272W	SKI3	P17883	1432 aa	Known RBP	5.57	□□□□□ -1.52
YTM1	YOR272W	RPL11A	P0C0W9	174 aa	Known RBP	5.56	□□□□□ -1.52
YTM1	YOR272W	ADP1	P25371	1049 aa		5.56	□□□□□ -1.52
YTM1	YOR272W	PNT1	P38969	423 aa		5.56	□□□□□ -1.52
YTM1	YOR272W	PIK1	P39104	1066 aa		5.56	□□□□□ -1.52
YTM1	YOR272W	GEM1	P39722	662 aa		5.56	□□□□□ -1.52
YTM1	YOR272W	SPO75	Q07798	868 aa		5.56	□□□□□ -1.52
YTM1	YOR272W	RPL11B	Q3E757	174 aa	Predicted RBP	5.56	□□□□□ -1.52
YTM1	YOR272W	SNF5	P18480	905 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	SCT1	P32784	759 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	YBR184W	P38299	523 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	TAT2	P38967	592 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	RSB1	Q08417	382 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	ACM1	Q08981	209 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	THS1	P04801	734 aa	Known RBP	5.55	□□□□□ -1.52
YTM1	YOR272W	GCD1	P09032	578 aa	Predicted RBP	5.55	□□□□□ -1.52
YTM1	YOR272W	PRO1	P32264	428 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	YKR073C	P36153	106 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	SIP5	P40210	489 aa	Known RBP	5.55	□□□□□ -1.52
YTM1	YOR272W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
YTM1	YOR272W	SSY1	Q03770	852 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	RSC58	Q07979	502 aa		5.55	□□□□□ -1.52
YTM1	YOR272W	RAD4	P14736	754 aa		5.54	□□□□□ -1.52
YTM1	YOR272W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.54	□□□□□ -1.52	not detected
YTM1	YOR272W	STE5	P32917	917 aa		5.54	□□□□□ -1.52
YTM1	YOR272W	TOS1	P38288	455 aa		5.54	□□□□□ -1.52
YTM1	YOR272W	PTC7	P38797	343 aa		5.54	□□□□□ -1.52
YTM1	YOR272W	MBP1	P39678	833 aa		5.54	□□□□□ -1.52
YTM1	YOR272W	MXR1	P40029	184 aa		5.54	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms