RNA–Protein interactions for RNA: YOR198C

BFR1, Transcript of Component of mRNP complexes associated with polyribosomes, yeast

Gene BFR1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR1	YOR198C	MGE1	P38523	228 aa		4.11	□□□□□ -1.75
BFR1	YOR198C	PIK1	P39104	1066 aa		4.11	□□□□□ -1.75
BFR1	YOR198C	RPS26A	P39938	119 aa	Known RBP	4.11	□□□□□ -1.75
BFR1	YOR198C	RPS26B	P39939	119 aa	Known RBP	4.11	□□□□□ -1.75
BFR1	YOR198C	RPN3	P40016	523 aa	Known RBP	4.11	□□□□□ -1.75
BFR1	YOR198C	POL32	P47110	350 aa		4.11	□□□□□ -1.75
BFR1	YOR198C	RAT1	Q02792	1006 aa	Known RBP	4.11	□□□□□ -1.75
BFR1	YOR198C	YPL277C	Q08989	487 aa		4.11	□□□□□ -1.75
BFR1	YOR198C	SNF5	P18480	905 aa		4.1	□□□□□ -1.75
BFR1	YOR198C	MKK2	P32491	506 aa		4.1	□□□□□ -1.75
BFR1	YOR198C	TOD6	P34219	525 aa		4.1	□□□□□ -1.75
BFR1	YOR198C	GNP1	P48813	663 aa		4.1	□□□□□ -1.75
BFR1	YOR198C	MRL1	Q06815	381 aa		4.1	□□□□□ -1.75
BFR1	YOR198C	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
BFR1	YOR198C	SEC8	P32855	1065 aa		4.09	□□□□□ -1.75
BFR1	YOR198C	PAM1	P37304	830 aa	Known RBP	4.09	□□□□□ -1.75
BFR1	YOR198C	NOP7	P53261	605 aa	Known RBP	4.09	□□□□□ -1.75
BFR1	YOR198C	YOR352W	Q08816	343 aa		4.09	□□□□□ -1.75
BFR1	YOR198C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
BFR1	YOR198C	MCM2	P29469	868 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	ASF1	P32447	279 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	RGD1	P38339	666 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	HXT13	P39924	564 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	SEC26	P41810	973 aa	Known RBP	4.08	□□□□□ -1.76
BFR1	YOR198C	YJR107W	P47145	328 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	HXT17	P53631	564 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	HXT15	P54854	567 aa		4.08	□□□□□ -1.76
BFR1	YOR198C	RRP15	Q06511	250 aa	Predicted RBP	4.08	□□□□□ -1.76
BFR1	YOR198C	SYP1	P25623	870 aa	Known RBP	4.07	□□□□□ -1.76
BFR1	YOR198C	FYV10	P40492	516 aa		4.07	□□□□□ -1.76
BFR1	YOR198C	YDR132C	Q03900	495 aa		4.07	□□□□□ -1.76
BFR1	YOR198C	SGD1	Q06132	899 aa		4.07	□□□□□ -1.76
BFR1	YOR198C	ATE1	P16639	503 aa		4.06	□□□□□ -1.76
BFR1	YOR198C	DBP5	P20449	482 aa	Known RBP	4.06	□□□□□ -1.76
BFR1	YOR198C	CNN1	P43618	361 aa		4.06	□□□□□ -1.76
BFR1	YOR198C	SPR28	Q04921	423 aa		4.06	□□□□□ -1.76
BFR1	YOR198C	ESF1	Q06344	628 aa	Known RBP	4.06	□□□□□ -1.76
BFR1	YOR198C	CYC1	P00044	109 aa	Predicted RBP	4.05	□□□□□ -1.76
BFR1	YOR198C	GCR1	P07261	785 aa		4.05	□□□□□ -1.76
BFR1	YOR198C	HNT2	P49775	206 aa		4.05	□□□□□ -1.76
BFR1	YOR198C	SPT20	P50875	604 aa		4.05	□□□□□ -1.76
BFR1	YOR198C	ORC1	P54784	914 aa	Predicted RBP	4.05	□□□□□ -1.76
BFR1	YOR198C	GCN5	Q03330	439 aa		4.05	□□□□□ -1.76
BFR1	YOR198C	CLU1	Q03690	1277 aa	Known RBP	4.05	□□□□□ -1.76
BFR1	YOR198C	YER152C	P10356	443 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	ABZ1	P37254	787 aa	Predicted RBP	4.04	□□□□□ -1.76
BFR1	YOR198C	LAM1	P38851	1228 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	YFL054C	P43549	646 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	YLR358C	O13565	187 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
BFR1	YOR198C	CTS1	P29029	562 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	MLS1	P30952	554 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	RSM24	Q03976	319 aa		4.04	□□□□□ -1.76
BFR1	YOR198C	RAD27	P26793	382 aa		4.03	□□□□□ -1.76
BFR1	YOR198C	RFC5	P38251	354 aa		4.03	□□□□□ -1.76
BFR1	YOR198C	MEF2	P39677	819 aa		4.03	□□□□□ -1.76
BFR1	YOR198C	MET10	P39692	1035 aa		4.03	□□□□□ -1.76
BFR1	YOR198C	MPH1	P40562	993 aa		4.03	□□□□□ -1.76
BFR1	YOR198C	RIB2	Q12362	591 aa	Known RBP	4.03	□□□□□ -1.76
BFR1	YOR198C	GAL10	P04397	699 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	CMP2	P14747	604 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	PEP7	P32609	515 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	MCM7	P38132	845 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	ROT1	Q03691	256 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	RTT10	Q08924	1013 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	SVS1	Q12254	260 aa		4.02	□□□□□ -1.77
BFR1	YOR198C	KIN2	P13186	1147 aa	Known RBP	4.01	□□□□□ -1.77
BFR1	YOR198C	BAS1	P22035	811 aa		4.01	□□□□□ -1.77
BFR1	YOR198C	RER2	P35196	286 aa		4.01	□□□□□ -1.77
BFR1	YOR198C	RMD1	Q03441	430 aa		4.01	□□□□□ -1.77
BFR1	YOR198C	TIF35	Q04067	274 aa	Known RBP	4.01	□□□□□ -1.77
BFR1	YOR198C	GNT1	Q12096	491 aa		4.01	□□□□□ -1.77
BFR1	YOR198C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
BFR1	YOR198C	PLB2	Q03674	706 aa		4	□□□□□ -1.77
BFR1	YOR198C	DUS4	Q06063	367 aa		4	□□□□□ -1.77
BFR1	YOR198C	SRM1	P21827	482 aa		3.99	□□□□□ -1.77
BFR1	YOR198C	APL1	P27351	700 aa		3.99	□□□□□ -1.77
BFR1	YOR198C	DOM34	P33309	386 aa		3.99	□□□□□ -1.77
BFR1	YOR198C	SHM2	P37291	469 aa	Known RBP	3.99	□□□□□ -1.77
BFR1	YOR198C	TAT2	P38967	592 aa		3.99	□□□□□ -1.77
BFR1	YOR198C	SIZ1	Q04195	904 aa		3.99	□□□□□ -1.77
BFR1	YOR198C	GSF2	Q04697	403 aa	Known RBP	3.99	□□□□□ -1.77
BFR1	YOR198C	ATG13	Q06628	738 aa		3.99	□□□□□ -1.77
BFR1	YOR198C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
BFR1	YOR198C	TMA46	Q12000	345 aa	Known RBP	3.99	□□□□□ -1.77
BFR1	YOR198C	UGA2	P38067	497 aa		3.98	□□□□□ -1.77
BFR1	YOR198C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
BFR1	YOR198C	SVF1	Q05515	481 aa		3.98	□□□□□ -1.77
BFR1	YOR198C	GPB1	Q08886	897 aa		3.98	□□□□□ -1.77
BFR1	YOR198C	ACM1	Q08981	209 aa		3.98	□□□□□ -1.77
BFR1	YOR198C	AIM44	Q99299	758 aa		3.98	□□□□□ -1.77
BFR1	YOR198C	TRP2	P00899	507 aa	Known RBP	3.97	□□□□□ -1.77
BFR1	YOR198C	RPL11A	P0C0W9	174 aa	Known RBP	3.97	□□□□□ -1.77
BFR1	YOR198C	LYP1	P32487	611 aa		3.97	□□□□□ -1.77
BFR1	YOR198C	PBP1	P53297	722 aa	Known RBP	3.97	□□□□□ -1.77
BFR1	YOR198C	OYE2	Q03558	400 aa	Known RBP	3.97	□□□□□ -1.77
BFR1	YOR198C	RXT3	Q07458	294 aa		3.97	□□□□□ -1.77
BFR1	YOR198C	ACK1	Q07622	623 aa	Predicted RBP	3.97	□□□□□ -1.77
BFR1	YOR198C	RPL11B	Q3E757	174 aa	Predicted RBP	3.97	□□□□□ -1.77
BFR1	YOR198C	BI4	P03879	638 aa		3.96	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms