RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YPL260WQ08977 551 aa3.76□□□□□ -1.81
RPB11YOL005C SSF2Q12153 453 aaPredicted RBP3.76□□□□□ -1.81
RPB11YOL005C TRP3P00937 484 aa3.75□□□□□ -1.81
RPB11YOL005C PRO1P32264 428 aa3.75□□□□□ -1.81
RPB11YOL005C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
RPB11YOL005C YVC1Q12324 675 aa3.75□□□□□ -1.81
RPB11YOL005C RKM4Q12504 494 aa3.75□□□□□ -1.81
RPB11YOL005C COQ4O13525 335 aa3.74□□□□□ -1.81
RPB11YOL005C YER152CP10356 443 aa3.74□□□□□ -1.81
RPB11YOL005C GRX1P25373 110 aaKnown RBP3.74□□□□□ -1.81
RPB11YOL005C YSC84P32793 468 aa3.74□□□□□ -1.81
RPB11YOL005C LIP5P32875 414 aa3.74□□□□□ -1.81
RPB11YOL005C SEA4P38164 1038 aa3.74□□□□□ -1.81
RPB11YOL005C TOS1P38288 455 aa3.74□□□□□ -1.81
RPB11YOL005C PTC7P38797 343 aa3.74□□□□□ -1.81
RPB11YOL005C SNF7P39929 240 aaKnown RBP3.74□□□□□ -1.81
RPB11YOL005C MPH1P40562 993 aa3.74□□□□□ -1.81
RPB11YOL005C GTS1P40956 396 aa3.74□□□□□ -1.81
RPB11YOL005C SDH1Q00711 640 aa3.74□□□□□ -1.81
RPB11YOL005C SPP382Q06411 708 aaPredicted RBP3.74□□□□□ -1.81
RPB11YOL005C MED7Q08278 222 aa3.74□□□□□ -1.81
RPB11YOL005C TRE1Q08919 783 aa3.74□□□□□ -1.81
RPB11YOL005C GCD1P09032 578 aaPredicted RBP3.73□□□□□ -1.81
RPB11YOL005C AIM26P32858 118 aa3.73□□□□□ -1.81
RPB11YOL005C OMA1P36163 345 aa3.73□□□□□ -1.81
RPB11YOL005C CCZ1P38273 704 aa3.73□□□□□ -1.81
RPB11YOL005C NNF1P47149 201 aa3.73□□□□□ -1.81
RPB11YOL005C HOS3Q02959 697 aaKnown RBP3.73□□□□□ -1.81
RPB11YOL005C RSB1Q08417 382 aa3.73□□□□□ -1.81
RPB11YOL005C GNT1Q12096 491 aa3.73□□□□□ -1.81
RPB11YOL005C YPL066WQ12194 479 aa3.73□□□□□ -1.81
RPB11YOL005C SBA1P28707 216 aaKnown RBP3.72□□□□□ -1.81
RPB11YOL005C MAC1P35192 417 aa3.72□□□□□ -1.81
RPB11YOL005C YKR073CP36153 106 aa3.72□□□□□ -1.81
RPB11YOL005C VBA5P36172 582 aa3.72□□□□□ -1.81
RPB11YOL005C MBP1P39678 833 aa3.72□□□□□ -1.81
RPB11YOL005C SPF1P39986 1215 aaKnown RBP3.72□□□□□ -1.81
RPB11YOL005C OYE3P41816 400 aaPredicted RBP3.72□□□□□ -1.81
RPB11YOL005C YFL054CP43549 646 aa3.72□□□□□ -1.81
RPB11YOL005C TIM54P47045 478 aa3.72□□□□□ -1.81
RPB11YOL005C TNA1P53322 534 aa3.72□□□□□ -1.81
RPB11YOL005C NBA1Q08229 501 aaKnown RBP3.72□□□□□ -1.81
RPB11YOL005C RAD4P14736 754 aa3.71□□□□□ -1.82
RPB11YOL005C ADP1P25371 1049 aa3.71□□□□□ -1.82
RPB11YOL005C AGP1P25376 633 aa3.71□□□□□ -1.82
RPB11YOL005C MDL2P33311 773 aa3.71□□□□□ -1.82
RPB11YOL005C PIN4P34217 668 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
RPB11YOL005C YBR184WP38299 523 aa3.71□□□□□ -1.82
RPB11YOL005C MXR1P40029 184 aa3.71□□□□□ -1.82
RPB11YOL005C SSY1Q03770 852 aa3.71□□□□□ -1.82
RPB11YOL005C RCL1Q08096 367 aaPredicted RBP3.71□□□□□ -1.82
RPB11YOL005C RPL11AP0C0W9 174 aaKnown RBP3.7□□□□□ -1.82
RPB11YOL005C SAM35P14693 329 aa3.7□□□□□ -1.82
RPB11YOL005C SRP40P32583 406 aaPredicted RBP3.7□□□□□ -1.82
RPB11YOL005C MRP8P35719 219 aa3.7□□□□□ -1.82
RPB11YOL005C NAN1Q02931 896 aaKnown RBP3.7□□□□□ -1.82
RPB11YOL005C CDC53Q12018 815 aaKnown RBP3.7□□□□□ -1.82
RPB11YOL005C RPL11BQ3E757 174 aaPredicted RBP3.7□□□□□ -1.82
RPB11YOL005C DBP2P24783 546 aaKnown RBP3.69□□□□□ -1.82
RPB11YOL005C UGA2P38067 497 aa3.69□□□□□ -1.82
RPB11YOL005C PEX7P39108 375 aa3.69□□□□□ -1.82
RPB11YOL005C RPN3P40016 523 aaKnown RBP3.69□□□□□ -1.82
RPB11YOL005C SIP5P40210 489 aaKnown RBP3.69□□□□□ -1.82
RPB11YOL005C FOL2P51601 243 aaKnown RBP3.69□□□□□ -1.82
RPB11YOL005C SHE9Q04172 456 aa3.69□□□□□ -1.82
RPB11YOL005C SPO75Q07798 868 aa3.69□□□□□ -1.82
RPB11YOL005C OSH2Q12451 1283 aa3.69□□□□□ -1.82
RPB11YOL005C YOL098CQ12496 1037 aa3.69□□□□□ -1.82
RPB11YOL005C SPS1P08458 490 aa3.68□□□□□ -1.82
RPB11YOL005C SRO9P25567 434 aaKnown RBP3.68□□□□□ -1.82
RPB11YOL005C ARE1P25628 610 aa3.68□□□□□ -1.82
RPB11YOL005C PPH3P32345 308 aa3.68□□□□□ -1.82
RPB11YOL005C STE5P32917 917 aa3.68□□□□□ -1.82
RPB11YOL005C YKL091CP33324 310 aaKnown RBP3.68□□□□□ -1.82
RPB11YOL005C IRR1P40541 1150 aa3.68□□□□□ -1.82
RPB11YOL005C YGR125WP53273 1036 aa3.68□□□□□ -1.82
RPB11YOL005C YDR306CQ06640 478 aa3.68□□□□□ -1.82
RPB11YOL005C BRE4Q07660 1125 aa3.68□□□□□ -1.82
RPB11YOL005C RSC58Q07979 502 aa3.68□□□□□ -1.82
RPB11YOL005C ACM1Q08981 209 aa3.68□□□□□ -1.82
RPB11YOL005C YOR131CQ12486 218 aa3.68□□□□□ -1.82
RPB11YOL005C AAR2P32357 355 aaPredicted RBP3.67□□□□□ -1.82
RPB11YOL005C PBY1P38254 753 aa3.67□□□□□ -1.82
RPB11YOL005C PIK1P39104 1066 aa3.67□□□□□ -1.82
RPB11YOL005C SAH1P39954 449 aaKnown RBP3.67□□□□□ -1.82
RPB11YOL005C ALR2P43553 858 aa3.67□□□□□ -1.82
RPB11YOL005C YJL049WP47048 450 aa3.67□□□□□ -1.82
RPB11YOL005C HUL5P53119 910 aa3.67□□□□□ -1.82
RPB11YOL005C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
RPB11YOL005C DUS3Q06053 668 aaKnown RBP3.67□□□□□ -1.82
RPB11YOL005C EAF1Q06337 982 aa3.67□□□□□ -1.82
RPB11YOL005C UBX5Q06682 500 aa3.67□□□□□ -1.82
RPB11YOL005C BI4P03879 638 aa3.66□□□□□ -1.82
RPB11YOL005C SNF5P18480 905 aa3.66□□□□□ -1.82
RPB11YOL005C PRP9P19736 530 aaKnown RBP3.66□□□□□ -1.82
RPB11YOL005C PUB1P32588 453 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
RPB11YOL005C HSP78P33416 811 aa3.66□□□□□ -1.82
RPB11YOL005C POL12P38121 705 aaPredicted RBP3.66□□□□□ -1.82
RPB11YOL005C PNT1P38969 423 aa3.66□□□□□ -1.82
RPB11YOL005C GEM1P39722 662 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms