RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRF5	YNL299W	GIP1	P38229	639 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	RFC1	P38630	861 aa	Known RBP	4.95	□□□□□ -1.62
TRF5	YNL299W	AAD14	P42884	376 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	MSN5	P52918	1224 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	PIL1	P53252	339 aa	Known RBP	4.95	□□□□□ -1.62
TRF5	YNL299W	ADI1	Q03677	179 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	EMG1	Q06287	252 aa	Known RBP	4.95	□□□□□ -1.62
TRF5	YNL299W	YOR296W	Q08748	1289 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	RAD50	P12753	1312 aa		4.95	□□□□□ -1.62
TRF5	YNL299W	GCR1	P07261	785 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	PRI2	P20457	528 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	OSM1	P21375	501 aa	Known RBP	4.94	□□□□□ -1.62
TRF5	YNL299W	YKL069W	P36088	180 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	YKR075C	P36155	307 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	BDH2	P39713	417 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	HXT13	P39924	564 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	SPF1	P39986	1215 aa	Known RBP	4.94	□□□□□ -1.62
TRF5	YNL299W	OPI10	Q08202	246 aa		4.94	□□□□□ -1.62
TRF5	YNL299W	ARG82	P07250	355 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	SLA1	P32790	1244 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	ATG36	P46983	293 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	NUT1	P53114	1132 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	YGR130C	P53278	816 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	SPO1	P53541	631 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	VPS20	Q04272	221 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	TY1A-DR3	Q12441	440 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	KCC4	P25389	1037 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	RPN12	P32496	274 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	YNG2	P38806	282 aa	Known RBP	4.93	□□□□□ -1.62
TRF5	YNL299W	RVS167	P39743	482 aa	Known RBP	4.93	□□□□□ -1.62
TRF5	YNL299W	MAM1	P40065	302 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	TPM2	P40414	161 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	PTK2	P47116	818 aa	Known RBP	4.93	□□□□□ -1.62
TRF5	YNL299W	ZDS1	P50111	915 aa	Known RBP	4.93	□□□□□ -1.62
TRF5	YNL299W	MON1	P53129	644 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	HXT17	P53631	564 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	MSH6	Q03834	1242 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	CSI1	Q04368	295 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	YOR131C	Q12486	218 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	LYS2	P07702	1392 aa		4.93	□□□□□ -1.62
TRF5	YNL299W	RAD4	P14736	754 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	IRE1	P32361	1115 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	YHR020W	P38708	688 aa	Known RBP	4.92	□□□□□ -1.62
TRF5	YNL299W	GYP7	P48365	746 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	HST1	P53685	503 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	KRE33	P53914	1056 aa	Known RBP	4.92	□□□□□ -1.62
TRF5	YNL299W	SRT1	Q03175	343 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	HRQ1	Q05549	1077 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	TDA5	Q06417	326 aa	Known RBP	4.92	□□□□□ -1.62
TRF5	YNL299W	ATG13	Q06628	738 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	PSH1	Q12161	406 aa		4.92	□□□□□ -1.62
TRF5	YNL299W	PDC6	P26263	563 aa	Known RBP	4.91	□□□□□ -1.62
TRF5	YNL299W	MIC60	P36112	540 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	AIM46	P38885	310 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	RPN11	P43588	306 aa	Known RBP	4.91	□□□□□ -1.62
TRF5	YNL299W	YJR115W	P47152	169 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	GNP1	P48813	663 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	EEB1	Q02891	456 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	RTT10	Q08924	1013 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	SRF1	Q12516	437 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	LEU1	P07264	779 aa	Known RBP	4.91	□□□□□ -1.62
TRF5	YNL299W	PYC2	P32327	1180 aa	Known RBP	4.91	□□□□□ -1.62
TRF5	YNL299W	YBR287W	P38355	427 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	NPR2	P39923	615 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	YTA6	P40328	754 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	RAD26	P40352	1085 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	NUP82	P40368	713 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	NAN1	Q02931	896 aa	Known RBP	4.91	□□□□□ -1.62
TRF5	YNL299W	ESC2	Q06340	456 aa		4.91	□□□□□ -1.62
TRF5	YNL299W	YIL165C	P40446	119 aa		4.9	□□□□□ -1.62
TRF5	YNL299W	SKP1	P52286	194 aa		4.9	□□□□□ -1.62
TRF5	YNL299W	YBP2	P53169	641 aa		4.9	□□□□□ -1.62
TRF5	YNL299W	TYW3	P53177	273 aa		4.9	□□□□□ -1.62
TRF5	YNL299W	CUS1	Q02554	436 aa	Predicted RBP	4.9	□□□□□ -1.62
TRF5	YNL299W	SRC1	Q03707	834 aa		4.9	□□□□□ -1.62
TRF5	YNL299W	BMS1	Q08965	1183 aa	Known RBP	4.9	□□□□□ -1.62
TRF5	YNL299W	COQ4	O13525	335 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	CCP1	P00431	361 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	BIK1	P11709	440 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	DAL1	P32375	460 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	TIM23	P32897	222 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	DID4	P36108	232 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	RSM25	P40496	264 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	HOS3	Q02959	697 aa	Known RBP	4.89	□□□□□ -1.63
TRF5	YNL299W	RPS19A	P07280	144 aa	Known RBP	4.89	□□□□□ -1.63
TRF5	YNL299W	RPS19B	P07281	144 aa	Predicted RBP	4.89	□□□□□ -1.63
TRF5	YNL299W	RNR2	P09938	399 aa	Known RBP	4.89	□□□□□ -1.63
TRF5	YNL299W	TSR4	P25040	408 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	STE5	P32917	917 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	TIM54	P47045	478 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	RMT2	Q03305	412 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	POB3	Q04636	552 aa	Known RBP	4.89	□□□□□ -1.63
TRF5	YNL299W	ALE1	Q08548	619 aa		4.89	□□□□□ -1.63
TRF5	YNL299W	VAS1	P07806	1104 aa	Known RBP	4.88	□□□□□ -1.63
TRF5	YNL299W	CDC16	P09798	840 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	HEM13	P11353	328 aa	Known RBP	4.88	□□□□□ -1.63
TRF5	YNL299W	RIM11	P38615	370 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	RGA1	P39083	1007 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	MNN1	P39106	762 aa		4.88	□□□□□ -1.63
TRF5	YNL299W	HYR1	P40581	163 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms