RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W MCM7P38132 845 aa6.65□□□□□ -1.34
SSU72YNL222W ORC3P54790 616 aa6.65□□□□□ -1.34
SSU72YNL222W EEB1Q02891 456 aa6.65□□□□□ -1.34
SSU72YNL222W HOS3Q02959 697 aaKnown RBP6.65□□□□□ -1.34
SSU72YNL222W TIF35Q04067 274 aaKnown RBP6.65□□□□□ -1.34
SSU72YNL222W TMA46Q12000 345 aaKnown RBP6.65□□□□□ -1.34
SSU72YNL222W TRP2P00899 507 aaKnown RBP6.64□□□□□ -1.35
SSU72YNL222W YER152CP10356 443 aa6.64□□□□□ -1.35
SSU72YNL222W MNR2P35724 969 aa6.64□□□□□ -1.35
SSU72YNL222W MPH1P40562 993 aa6.64□□□□□ -1.35
SSU72YNL222W YFL054CP43549 646 aa6.64□□□□□ -1.35
SSU72YNL222W ECL1P48235 211 aa6.64□□□□□ -1.35
SSU72YNL222W RSC58Q07979 502 aa6.64□□□□□ -1.35
SSU72YNL222W SNF5P18480 905 aa6.63□□□□□ -1.35
SSU72YNL222W CCZ1P38273 704 aa6.63□□□□□ -1.35
SSU72YNL222W RPN3P40016 523 aaKnown RBP6.63□□□□□ -1.35
SSU72YNL222W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
SSU72YNL222W NBA1Q08229 501 aaKnown RBP6.63□□□□□ -1.35
SSU72YNL222W LYP1P32487 611 aa6.62□□□□□ -1.35
SSU72YNL222W MOT2P34909 587 aaKnown RBP6.62□□□□□ -1.35
SSU72YNL222W BAP2P38084 609 aa6.62□□□□□ -1.35
SSU72YNL222W MET10P39692 1035 aa6.62□□□□□ -1.35
SSU72YNL222W HNT2P49775 206 aa6.62□□□□□ -1.35
SSU72YNL222W JIP5Q06214 492 aaPredicted RBP6.62□□□□□ -1.35
SSU72YNL222W GAS1P22146 559 aaKnown RBP6.61□□□□□ -1.35
SSU72YNL222W PUF4P25339 888 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
SSU72YNL222W RNQ1P25367 405 aa6.61□□□□□ -1.35
SSU72YNL222W ETP1P38748 585 aaKnown RBP6.61□□□□□ -1.35
SSU72YNL222W FAA4P47912 694 aaKnown RBP6.61□□□□□ -1.35
SSU72YNL222W YDL177CQ12257 170 aa6.61□□□□□ -1.35
SSU72YNL222W PIK1P39104 1066 aa6.6□□□□□ -1.35
SSU72YNL222W FOL2P51601 243 aaKnown RBP6.6□□□□□ -1.35
SSU72YNL222W SNU71P53207 620 aaKnown RBP6.6□□□□□ -1.35
SSU72YNL222W SPS1P08458 490 aa6.59□□□□□ -1.35
SSU72YNL222W MAD1P40957 749 aa6.59□□□□□ -1.35
SSU72YNL222W TYW3P53177 273 aa6.59□□□□□ -1.35
SSU72YNL222W RSB1Q08417 382 aa6.59□□□□□ -1.35
SSU72YNL222W INO1P11986 533 aa6.58□□□□□ -1.36
SSU72YNL222W GDE1Q02979 1223 aa6.58□□□□□ -1.36
SSU72YNL222W VPS16Q03308 798 aa6.58□□□□□ -1.36
SSU72YNL222W SVF1Q05515 481 aa6.58□□□□□ -1.36
SSU72YNL222W GNT1Q12096 491 aa6.58□□□□□ -1.36
SSU72YNL222W CLN2P20438 545 aa6.57□□□□□ -1.36
SSU72YNL222W UBP5P39944 805 aa6.57□□□□□ -1.36
SSU72YNL222W NIT1P40447 199 aa6.57□□□□□ -1.36
SSU72YNL222W ESC2Q06340 456 aa6.57□□□□□ -1.36
SSU72YNL222W PIN2Q12057 282 aa6.57□□□□□ -1.36
SSU72YNL222W YPL066WQ12194 479 aa6.57□□□□□ -1.36
SSU72YNL222W TSA1P34760 196 aaKnown RBP6.56□□□□□ -1.36
SSU72YNL222W MXR1P40029 184 aa6.56□□□□□ -1.36
SSU72YNL222W PRP43P53131 767 aaKnown RBP6.56□□□□□ -1.36
SSU72YNL222W YGR053CP53234 283 aa6.56□□□□□ -1.36
SSU72YNL222W CWC24P53769 259 aa6.56□□□□□ -1.36
SSU72YNL222W YLR225CQ05948 407 aaKnown RBP6.56□□□□□ -1.36
SSU72YNL222W CDA2Q06703 312 aa6.56□□□□□ -1.36
SSU72YNL222W RPL11AP0C0W9 174 aaKnown RBP6.55□□□□□ -1.36
SSU72YNL222W BAS1P22035 811 aa6.55□□□□□ -1.36
SSU72YNL222W SPO20Q04359 397 aa6.55□□□□□ -1.36
SSU72YNL222W SPP382Q06411 708 aaPredicted RBP6.55□□□□□ -1.36
SSU72YNL222W RPL11BQ3E757 174 aaPredicted RBP6.55□□□□□ -1.36
SSU72YNL222W NAP1P25293 417 aaKnown RBP6.54□□□□□ -1.36
SSU72YNL222W YKL107WP34251 309 aa6.54□□□□□ -1.36
SSU72YNL222W YGL176CP46945 554 aa6.54□□□□□ -1.36
SSU72YNL222W MRPL22P53881 309 aa6.54□□□□□ -1.36
SSU72YNL222W RKM4Q12504 494 aa6.54□□□□□ -1.36
SSU72YNL222W DBP2P24783 546 aaKnown RBP6.53□□□□□ -1.36
SSU72YNL222W ABZ1P37254 787 aaPredicted RBP6.53□□□□□ -1.36
SSU72YNL222W PAM1P37304 830 aaKnown RBP6.53□□□□□ -1.36
SSU72YNL222W SEC26P41810 973 aaKnown RBP6.53□□□□□ -1.36
SSU72YNL222W ABD1P32783 436 aaPredicted RBP6.52□□□□□ -1.37
SSU72YNL222W FAL1Q12099 399 aaKnown RBP6.52□□□□□ -1.37
SSU72YNL222W PRI2P20457 528 aa6.51□□□□□ -1.37
SSU72YNL222W UGA2P38067 497 aa6.51□□□□□ -1.37
SSU72YNL222W PNT1P38969 423 aa6.51□□□□□ -1.37
SSU72YNL222W SNO2P53823 222 aa6.51□□□□□ -1.37
SSU72YNL222W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
SSU72YNL222W ACM1Q08981 209 aa6.51□□□□□ -1.37
SSU72YNL222W AIM3P38266 947 aaKnown RBP6.5□□□□□ -1.37
SSU72YNL222W VAC8P39968 578 aa6.5□□□□□ -1.37
SSU72YNL222W SIP5P40210 489 aaKnown RBP6.5□□□□□ -1.37
SSU72YNL222W ALD6P54115 500 aaKnown RBP6.5□□□□□ -1.37
SSU72YNL222W SVS1Q12254 260 aa6.5□□□□□ -1.37
SSU72YNL222W CYC1P00044 109 aaPredicted RBP6.49□□□□□ -1.37
SSU72YNL222W SLA2P33338 968 aa6.49□□□□□ -1.37
SSU72YNL222W RFC5P38251 354 aa6.49□□□□□ -1.37
SSU72YNL222W ENV11P53246 860 aa6.49□□□□□ -1.37
SSU72YNL222W BI4P03879 638 aa6.48□□□□□ -1.37
SSU72YNL222W YKL069WP36088 180 aa6.48□□□□□ -1.37
SSU72YNL222W RIB2Q12362 591 aaKnown RBP6.48□□□□□ -1.37
SSU72YNL222W RSM24Q03976 319 aa6.47□□□□□ -1.37
SSU72YNL222W OPI10Q08202 246 aa6.47□□□□□ -1.37
SSU72YNL222W GEM1P39722 662 aa6.46□□□□□ -1.38
SSU72YNL222W YOR352WQ08816 343 aa6.46□□□□□ -1.38
SSU72YNL222W CMP2P14747 604 aa6.45□□□□□ -1.38
SSU72YNL222W PRP6P19735 899 aaPredicted RBP6.45□□□□□ -1.38
SSU72YNL222W AGP1P25376 633 aa6.45□□□□□ -1.38
SSU72YNL222W APL1P27351 700 aa6.45□□□□□ -1.38
SSU72YNL222W PIN4P34217 668 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SSU72YNL222W MBP1P39678 833 aa6.45□□□□□ -1.38
SSU72YNL222W ROT1Q03691 256 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms