RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A MMR1Q06324 491 aa7.28□□□□□ -1.24
KSH1YNL024C-A ESC2Q06340 456 aa7.28□□□□□ -1.24
KSH1YNL024C-A ISU2Q12056 156 aa7.28□□□□□ -1.24
KSH1YNL024C-A CIT1P00890 479 aa7.27□□□□□ -1.25
KSH1YNL024C-A MET6P05694 767 aaKnown RBP7.27□□□□□ -1.25
KSH1YNL024C-A NUC1P08466 329 aa7.27□□□□□ -1.25
KSH1YNL024C-A URA1P28272 314 aaPredicted RBP7.27□□□□□ -1.25
KSH1YNL024C-A PRO3P32263 286 aaKnown RBP7.27□□□□□ -1.25
KSH1YNL024C-A SAS3P34218 831 aa7.27□□□□□ -1.25
KSH1YNL024C-A MDM1Q01846 1127 aa7.27□□□□□ -1.25
KSH1YNL024C-A VPS30Q02948 557 aa7.27□□□□□ -1.25
KSH1YNL024C-A CSC1Q06538 782 aa7.27□□□□□ -1.25
KSH1YNL024C-A THR4P16120 514 aaKnown RBP7.26□□□□□ -1.25
KSH1YNL024C-A MCM2P29469 868 aa7.26□□□□□ -1.25
KSH1YNL024C-A CST26P38226 397 aa7.26□□□□□ -1.25
KSH1YNL024C-A RSC30P38781 883 aa7.26□□□□□ -1.25
KSH1YNL024C-A DMA1P38823 416 aa7.26□□□□□ -1.25
KSH1YNL024C-A UTP7P40055 554 aaKnown RBP7.26□□□□□ -1.25
KSH1YNL024C-A MTC3P53077 123 aa7.26□□□□□ -1.25
KSH1YNL024C-A LSB1P53281 241 aa7.26□□□□□ -1.25
KSH1YNL024C-A HCR1Q05775 265 aaKnown RBP7.26□□□□□ -1.25
KSH1YNL024C-A FOB1O13329 566 aa7.25□□□□□ -1.25
KSH1YNL024C-A CYC8P14922 966 aa7.25□□□□□ -1.25
KSH1YNL024C-A VPS1P21576 704 aaKnown RBP7.25□□□□□ -1.25
KSH1YNL024C-A RAM1P22007 431 aa7.25□□□□□ -1.25
KSH1YNL024C-A ADP1P25371 1049 aa7.25□□□□□ -1.25
KSH1YNL024C-A SRO9P25567 434 aaKnown RBP7.25□□□□□ -1.25
KSH1YNL024C-A MCM4P30665 933 aaKnown RBP7.25□□□□□ -1.25
KSH1YNL024C-A HIR1P32479 840 aa7.25□□□□□ -1.25
KSH1YNL024C-A VPS45P38932 577 aa7.25□□□□□ -1.25
KSH1YNL024C-A NCS6P53088 359 aa7.25□□□□□ -1.25
KSH1YNL024C-A GFD1Q04839 188 aaKnown RBP7.25□□□□□ -1.25
KSH1YNL024C-A PTC5Q12511 572 aa7.25□□□□□ -1.25
KSH1YNL024C-A GAL2P13181 574 aa7.24□□□□□ -1.25
KSH1YNL024C-A CKA2P19454 339 aa7.24□□□□□ -1.25
KSH1YNL024C-A SRP54P20424 541 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A MOT2P34909 587 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A MNN4P36044 1178 aa7.24□□□□□ -1.25
KSH1YNL024C-A APE3P37302 537 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A ADE17P38009 592 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A BCD1P38772 366 aa7.24□□□□□ -1.25
KSH1YNL024C-A STT3P39007 718 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A NIT1P40447 199 aa7.24□□□□□ -1.25
KSH1YNL024C-A THI6P41835 540 aa7.24□□□□□ -1.25
KSH1YNL024C-A VTC2P43585 828 aa7.24□□□□□ -1.25
KSH1YNL024C-A STU2P46675 888 aa7.24□□□□□ -1.25
KSH1YNL024C-A CSM3Q04659 317 aa7.24□□□□□ -1.25
KSH1YNL024C-A EIS1Q05050 843 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A VIP1Q06685 1146 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A YDL124WQ07551 312 aaKnown RBP7.24□□□□□ -1.25
KSH1YNL024C-A YPR015CQ12531 247 aa7.24□□□□□ -1.25
KSH1YNL024C-A VPS13Q07878 3144 aa7.24□□□□□ -1.25
KSH1YNL024C-A HIS4P00815 799 aaKnown RBP7.23□□□□□ -1.25
KSH1YNL024C-A PMA1P05030 918 aaKnown RBP7.23□□□□□ -1.25
KSH1YNL024C-A RPL8AP17076 256 aaKnown RBP7.23□□□□□ -1.25
KSH1YNL024C-A RAD53P22216 821 aa7.23□□□□□ -1.25
KSH1YNL024C-A CHS3P29465 1165 aa7.23□□□□□ -1.25
KSH1YNL024C-A SAP190P36123 1033 aa7.23□□□□□ -1.25
KSH1YNL024C-A KIC1P38692 1080 aa7.23□□□□□ -1.25
KSH1YNL024C-A SOL4P53315 255 aa7.23□□□□□ -1.25
KSH1YNL024C-A BNI5P53890 448 aaKnown RBP7.23□□□□□ -1.25
KSH1YNL024C-A RBA50Q04418 439 aa7.23□□□□□ -1.25
KSH1YNL024C-A SLK19Q08581 821 aaKnown RBP7.23□□□□□ -1.25
KSH1YNL024C-A ERG12P07277 443 aa7.22□□□□□ -1.25
KSH1YNL024C-A SES1P07284 462 aaKnown RBP7.22□□□□□ -1.25
KSH1YNL024C-A STI1P15705 589 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
KSH1YNL024C-A PWP2P25635 923 aaKnown RBP7.22□□□□□ -1.25
KSH1YNL024C-A SRP40P32583 406 aaPredicted RBP7.22□□□□□ -1.25
KSH1YNL024C-A SAC6P32599 642 aaKnown RBP7.22□□□□□ -1.25
KSH1YNL024C-A YBL028CP38202 106 aa7.22□□□□□ -1.25
KSH1YNL024C-A NOC2P39744 710 aaKnown RBP7.22□□□□□ -1.25
KSH1YNL024C-A ATG32P40458 529 aa7.22□□□□□ -1.25
KSH1YNL024C-A ROG3P43602 733 aa7.22□□□□□ -1.25
KSH1YNL024C-A CTR9P89105 1077 aa7.22□□□□□ -1.25
KSH1YNL024C-A WAR1Q03631 944 aa7.22□□□□□ -1.25
KSH1YNL024C-A SPB4P25808 606 aaPredicted RBP7.21□□□□□ -1.26
KSH1YNL024C-A YGR153WP48238 217 aa7.21□□□□□ -1.26
KSH1YNL024C-A SSL2Q00578 843 aa7.21□□□□□ -1.26
KSH1YNL024C-A TRS120Q04183 1289 aa7.21□□□□□ -1.26
KSH1YNL024C-A SUB2Q07478 446 aaKnown RBP7.21□□□□□ -1.26
KSH1YNL024C-A RPP1BP10622 106 aaKnown RBP7.2□□□□□ -1.26
KSH1YNL024C-A MAC1P35192 417 aa7.2□□□□□ -1.26
KSH1YNL024C-A TPS3P38426 1054 aaKnown RBP7.2□□□□□ -1.26
KSH1YNL024C-A ORC6P38826 435 aa7.2□□□□□ -1.26
KSH1YNL024C-A LYS14P40971 790 aa7.2□□□□□ -1.26
KSH1YNL024C-A DSE4P53753 1117 aa7.2□□□□□ -1.26
KSH1YNL024C-A VPS75P53853 264 aa7.2□□□□□ -1.26
KSH1YNL024C-A BUL2Q03758 920 aaKnown RBP7.2□□□□□ -1.26
KSH1YNL024C-A GIS4Q04233 774 aa7.2□□□□□ -1.26
KSH1YNL024C-A VMS1Q04311 632 aaKnown RBP7.2□□□□□ -1.26
KSH1YNL024C-A MYO1P08964 1928 aa7.19□□□□□ -1.26
KSH1YNL024C-A COX6P00427 148 aa7.19□□□□□ -1.26
KSH1YNL024C-A PDR1P12383 1068 aa7.19□□□□□ -1.26
KSH1YNL024C-A PHO13P19881 312 aa7.19□□□□□ -1.26
KSH1YNL024C-A CDC15P27636 974 aa7.19□□□□□ -1.26
KSH1YNL024C-A TIF4631P39935 952 aaKnown RBP7.19□□□□□ -1.26
KSH1YNL024C-A FYV10P40492 516 aa7.19□□□□□ -1.26
KSH1YNL024C-A UBA2P52488 636 aa7.19□□□□□ -1.26
KSH1YNL024C-A SDA1P53313 767 aaKnown RBP7.19□□□□□ -1.26
KSH1YNL024C-A SEC5P89102 971 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms