RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YNR014WP53719 212 aa6.21□□□□□ -1.42
CCS1YMR038C HAS1Q03532 505 aaKnown RBP6.21□□□□□ -1.42
CCS1YMR038C DAL4Q04895 635 aa6.21□□□□□ -1.42
CCS1YMR038C YLR278CQ05854 1341 aa6.21□□□□□ -1.42
CCS1YMR038C AUS1Q08409 1394 aa6.2□□□□□ -1.42
CCS1YMR038C HXK1P04806 485 aaKnown RBP6.2□□□□□ -1.42
CCS1YMR038C RPS9BP05755 195 aaKnown RBP6.2□□□□□ -1.42
CCS1YMR038C OSM1P21375 501 aaKnown RBP6.2□□□□□ -1.42
CCS1YMR038C MCM2P29469 868 aa6.2□□□□□ -1.42
CCS1YMR038C SEC8P32855 1065 aa6.2□□□□□ -1.42
CCS1YMR038C YAF9P53930 226 aa6.2□□□□□ -1.42
CCS1YMR038C TDA6Q06466 467 aa6.2□□□□□ -1.42
CCS1YMR038C PMT7Q06644 662 aa6.2□□□□□ -1.42
CCS1YMR038C OXR1Q08952 273 aa6.2□□□□□ -1.42
CCS1YMR038C FAS2P19097 1887 aaKnown RBP6.19□□□□□ -1.42
CCS1YMR038C TY4B-PA0A0B7P3V8 1104 aa6.19□□□□□ -1.42
CCS1YMR038C ICL1P28240 557 aaPredicted RBP6.19□□□□□ -1.42
CCS1YMR038C PFF1P38244 976 aa6.19□□□□□ -1.42
CCS1YMR038C ETP1P38748 585 aaKnown RBP6.19□□□□□ -1.42
CCS1YMR038C PAN5P38787 379 aa6.19□□□□□ -1.42
CCS1YMR038C NEO1P40527 1151 aa6.19□□□□□ -1.42
CCS1YMR038C FET4P40988 552 aa6.19□□□□□ -1.42
CCS1YMR038C LEM3P42838 414 aa6.19□□□□□ -1.42
CCS1YMR038C NSG2P53898 299 aa6.19□□□□□ -1.42
CCS1YMR038C TY4A-HQ6Q5P6 413 aa6.19□□□□□ -1.42
CCS1YMR038C MCM5P29496 775 aaKnown RBP6.18□□□□□ -1.42
CCS1YMR038C SCT1P32784 759 aa6.18□□□□□ -1.42
CCS1YMR038C MCX1P38323 520 aaPredicted RBP6.18□□□□□ -1.42
CCS1YMR038C RVS167P39743 482 aaKnown RBP6.18□□□□□ -1.42
CCS1YMR038C OYE2Q03558 400 aaKnown RBP6.18□□□□□ -1.42
CCS1YMR038C SPR28Q04921 423 aa6.18□□□□□ -1.42
CCS1YMR038C HIM1Q06674 414 aa6.18□□□□□ -1.42
CCS1YMR038C YKU70P32807 602 aa6.17□□□□□ -1.42
CCS1YMR038C YGR122WP53272 402 aa6.17□□□□□ -1.42
CCS1YMR038C ULP1Q02724 621 aa6.17□□□□□ -1.42
CCS1YMR038C IRC3Q06683 689 aa6.17□□□□□ -1.42
CCS1YMR038C HTS1P07263 546 aaKnown RBP6.16□□□□□ -1.42
CCS1YMR038C SMY1P32364 656 aaKnown RBP6.16□□□□□ -1.42
CCS1YMR038C SHC1P39000 512 aa6.16□□□□□ -1.42
CCS1YMR038C RPS26AP39938 119 aaKnown RBP6.16□□□□□ -1.42
CCS1YMR038C RPS26BP39939 119 aaKnown RBP6.16□□□□□ -1.42
CCS1YMR038C POL5P39985 1022 aaKnown RBP6.16□□□□□ -1.42
CCS1YMR038C BUD27P43573 796 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CCS1YMR038C YPL109CQ02981 657 aa6.16□□□□□ -1.42
CCS1YMR038C SPO71Q03868 1245 aa6.16□□□□□ -1.42
CCS1YMR038C SEC3P33332 1336 aaKnown RBP6.16□□□□□ -1.42
CCS1YMR038C POM152P39685 1337 aa6.16□□□□□ -1.42
CCS1YMR038C LPD1P09624 499 aaKnown RBP6.15□□□□□ -1.42
CCS1YMR038C CYC8P14922 966 aa6.15□□□□□ -1.42
CCS1YMR038C KAR2P16474 682 aaKnown RBP6.15□□□□□ -1.42
CCS1YMR038C RRM3P38766 723 aa6.15□□□□□ -1.42
CCS1YMR038C MSM1P22438 575 aa6.14□□□□□ -1.43
CCS1YMR038C ADI1Q03677 179 aa6.14□□□□□ -1.43
CCS1YMR038C GAS5Q08193 484 aa6.14□□□□□ -1.43
CCS1YMR038C YIG1Q08956 461 aa6.14□□□□□ -1.43
CCS1YMR038C RAD2P07276 1031 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-LR4P0C2I8 440 aaKnown RBP6.13□□□□□ -1.43
CCS1YMR038C TY1A-DR6P0CX70 440 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-ER1P0CX71 440 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-LR2P0CX72 440 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-PLP0CX73 440 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-JR1P0CX74 440 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-LR3P0CX75 440 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-ML2P0CX76 440 aa6.13□□□□□ -1.43
CCS1YMR038C SAC7P17121 654 aa6.13□□□□□ -1.43
CCS1YMR038C YCK2P23292 546 aaKnown RBP6.13□□□□□ -1.43
CCS1YMR038C GRX4P32642 244 aa6.13□□□□□ -1.43
CCS1YMR038C SER1P33330 395 aaKnown RBP6.13□□□□□ -1.43
CCS1YMR038C PIC2P40035 300 aa6.13□□□□□ -1.43
CCS1YMR038C YIL089WP40500 205 aa6.13□□□□□ -1.43
CCS1YMR038C BUD9P53226 547 aa6.13□□□□□ -1.43
CCS1YMR038C NOG1Q02892 647 aaKnown RBP6.13□□□□□ -1.43
CCS1YMR038C TAP42Q04372 366 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-GR1Q12085 440 aa6.13□□□□□ -1.43
CCS1YMR038C YDR215CQ12240 137 aa6.13□□□□□ -1.43
CCS1YMR038C PHM7Q12252 991 aa6.13□□□□□ -1.43
CCS1YMR038C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.13□□□□□ -1.43
CCS1YMR038C TY1A-OLQ92392 440 aaKnown RBP6.13□□□□□ -1.43
CCS1YMR038C EXO5P38289 585 aa6.12□□□□□ -1.43
CCS1YMR038C ICP55P40051 511 aa6.12□□□□□ -1.43
CCS1YMR038C NUP145P49687 1317 aa6.12□□□□□ -1.43
CCS1YMR038C ERO1Q03103 563 aa6.12□□□□□ -1.43
CCS1YMR038C ELG1Q12050 791 aa6.12□□□□□ -1.43
CCS1YMR038C ERS1P17261 260 aa6.11□□□□□ -1.43
CCS1YMR038C SLN1P39928 1220 aaPredicted RBP6.11□□□□□ -1.43
CCS1YMR038C PRY1P47032 299 aa6.11□□□□□ -1.43
CCS1YMR038C DSE4P53753 1117 aa6.11□□□□□ -1.43
CCS1YMR038C TY1A-NL1Q12391 440 aaKnown RBP6.11□□□□□ -1.43
CCS1YMR038C GRX6Q12438 231 aa6.11□□□□□ -1.43
CCS1YMR038C PRE9P23638 258 aaKnown RBP6.1□□□□□ -1.43
CCS1YMR038C HSP104P31539 908 aaKnown RBP6.1□□□□□ -1.43
CCS1YMR038C MRPS18P42847 217 aa6.1□□□□□ -1.43
CCS1YMR038C RSM26P47141 266 aa6.1□□□□□ -1.43
CCS1YMR038C SNU71P53207 620 aaKnown RBP6.1□□□□□ -1.43
CCS1YMR038C RAT1Q02792 1006 aaKnown RBP6.1□□□□□ -1.43
CCS1YMR038C YMR187CQ03236 431 aa6.1□□□□□ -1.43
CCS1YMR038C BDF2Q07442 638 aa6.1□□□□□ -1.43
CCS1YMR038C YPR053CQ6Q5F3 151 aa6.1□□□□□ -1.43
CCS1YMR038C TOM1Q03280 3268 aa6.1□□□□□ -1.43
CCS1YMR038C AI3P03877 415 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms