RNA–Protein interactions for RNA: YLR301W

HRI1, Transcript of Protein of unknown function that interacts with Sec72p and Hrr25p, yeast

Gene HRI1, Length 735 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRI1	YLR301W	SHM2	P37291	469 aa	Known RBP	4.7	□□□□□ -1.66
HRI1	YLR301W	SPT20	P50875	604 aa		4.7	□□□□□ -1.66
HRI1	YLR301W	GCN5	Q03330	439 aa		4.7	□□□□□ -1.66
HRI1	YLR301W	MCD1	Q12158	566 aa		4.7	□□□□□ -1.66
HRI1	YLR301W	SPO21	Q12411	609 aa		4.7	□□□□□ -1.66
HRI1	YLR301W	CYC1	P00044	109 aa	Predicted RBP	4.69	□□□□□ -1.66
HRI1	YLR301W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
HRI1	YLR301W	CTS1	P29029	562 aa		4.69	□□□□□ -1.66
HRI1	YLR301W	MRPS18	P42847	217 aa		4.69	□□□□□ -1.66
HRI1	YLR301W	YGR122W	P53272	402 aa		4.69	□□□□□ -1.66
HRI1	YLR301W	PRE9	P23638	258 aa	Known RBP	4.68	□□□□□ -1.66
HRI1	YLR301W	TAT2	P38967	592 aa		4.68	□□□□□ -1.66
HRI1	YLR301W	RAT1	Q02792	1006 aa	Known RBP	4.68	□□□□□ -1.66
HRI1	YLR301W	IPL1	P38991	367 aa		4.67	□□□□□ -1.66
HRI1	YLR301W	ENT3	P47160	408 aa		4.67	□□□□□ -1.66
HRI1	YLR301W	ROD1	Q02805	837 aa		4.67	□□□□□ -1.66
HRI1	YLR301W	PLB2	Q03674	706 aa		4.67	□□□□□ -1.66
HRI1	YLR301W	ROT1	Q03691	256 aa		4.67	□□□□□ -1.66
HRI1	YLR301W	MKK2	P32491	506 aa		4.66	□□□□□ -1.66
HRI1	YLR301W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
HRI1	YLR301W	SIW14	P53965	281 aa		4.66	□□□□□ -1.66
HRI1	YLR301W	DUS4	Q06063	367 aa		4.66	□□□□□ -1.66
HRI1	YLR301W	TUB2	P02557	457 aa	Known RBP	4.65	□□□□□ -1.67
HRI1	YLR301W	DOM34	P33309	386 aa		4.65	□□□□□ -1.67
HRI1	YLR301W	RSM24	Q03976	319 aa		4.65	□□□□□ -1.67
HRI1	YLR301W	RAD2	P07276	1031 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	SEC8	P32855	1065 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	RFC5	P38251	354 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	RGD1	P38339	666 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	HXT13	P39924	564 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	YFL054C	P43549	646 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	GNP1	P48813	663 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	HXT17	P53631	564 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	HXT15	P54854	567 aa		4.64	□□□□□ -1.67
HRI1	YLR301W	GAL10	P04397	699 aa		4.63	□□□□□ -1.67
HRI1	YLR301W	CMP2	P14747	604 aa		4.63	□□□□□ -1.67
HRI1	YLR301W	CYC8	P14922	966 aa		4.63	□□□□□ -1.67
HRI1	YLR301W	SRM1	P21827	482 aa		4.63	□□□□□ -1.67
HRI1	YLR301W	SEN54	Q02825	467 aa	Predicted RBP	4.63	□□□□□ -1.67
HRI1	YLR301W	YER152C	P10356	443 aa		4.62	□□□□□ -1.67
HRI1	YLR301W	SYP1	P25623	870 aa	Known RBP	4.62	□□□□□ -1.67
HRI1	YLR301W	RPS26A	P39938	119 aa	Known RBP	4.62	□□□□□ -1.67
HRI1	YLR301W	RPS26B	P39939	119 aa	Known RBP	4.62	□□□□□ -1.67
HRI1	YLR301W	YML020W	Q03722	664 aa		4.62	□□□□□ -1.67
HRI1	YLR301W	NOP8	Q08287	484 aa	Predicted RBP	4.62	□□□□□ -1.67
HRI1	YLR301W	KIN2	P13186	1147 aa	Known RBP	4.61	□□□□□ -1.67
HRI1	YLR301W	CDC20	P26309	610 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	MLS1	P30952	554 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	SLD2	P34252	453 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	CNN1	P43618	361 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	MRL1	Q06815	381 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	RXT3	Q07458	294 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	ACK1	Q07622	623 aa	Predicted RBP	4.61	□□□□□ -1.67
HRI1	YLR301W	SVS1	Q12254	260 aa		4.61	□□□□□ -1.67
HRI1	YLR301W	RIB2	Q12362	591 aa	Known RBP	4.61	□□□□□ -1.67
HRI1	YLR301W	GCR1	P07261	785 aa		4.6	□□□□□ -1.67
HRI1	YLR301W	DBP5	P20449	482 aa	Known RBP	4.6	□□□□□ -1.67
HRI1	YLR301W	PBP1	P53297	722 aa	Known RBP	4.6	□□□□□ -1.67
HRI1	YLR301W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	RIP-Chip
HRI1	YLR301W	ATG13	Q06628	738 aa		4.6	□□□□□ -1.67
HRI1	YLR301W	GPB1	Q08886	897 aa		4.6	□□□□□ -1.67
HRI1	YLR301W	PNS1	Q12412	539 aa		4.6	□□□□□ -1.67
HRI1	YLR301W	CDC6	P09119	513 aa		4.59	□□□□□ -1.67
HRI1	YLR301W	APL1	P27351	700 aa		4.59	□□□□□ -1.67
HRI1	YLR301W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
HRI1	YLR301W	STE11	P23561	717 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	MCM2	P29469	868 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	TRM2	P33753	639 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	LST4	P34239	828 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	MPH1	P40562	993 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	GIS1	Q03833	894 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	SIZ1	Q04195	904 aa		4.58	□□□□□ -1.68
HRI1	YLR301W	MNN10	P50108	393 aa	Known RBP	4.57	□□□□□ -1.68
HRI1	YLR301W	PUS9	Q12069	462 aa		4.57	□□□□□ -1.68
HRI1	YLR301W	BAS1	P22035	811 aa		4.56	□□□□□ -1.68
HRI1	YLR301W	HCM1	P25364	564 aa		4.56	□□□□□ -1.68
HRI1	YLR301W	POL32	P47110	350 aa		4.56	□□□□□ -1.68
HRI1	YLR301W	MCM6	P53091	1017 aa	Known RBP	4.56	□□□□□ -1.68
HRI1	YLR301W	VPS62	P53285	467 aa		4.56	□□□□□ -1.68
HRI1	YLR301W	TMA10	Q06177	86 aa		4.56	□□□□□ -1.68
HRI1	YLR301W	RER2	P35196	286 aa		4.55	□□□□□ -1.68
HRI1	YLR301W	YJR107W	P47145	328 aa		4.55	□□□□□ -1.68
HRI1	YLR301W	MSC2	Q03455	724 aa		4.55	□□□□□ -1.68
HRI1	YLR301W	YAP6	Q03935	383 aa		4.55	□□□□□ -1.68
HRI1	YLR301W	ATE1	P16639	503 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	ACE2	P21192	770 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	RAD27	P26793	382 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	MXR1	P40029	184 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	MSE1	P48525	536 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	GTF1	P53260	183 aa	Predicted RBP	4.54	□□□□□ -1.68
HRI1	YLR301W	TIF35	Q04067	274 aa	Known RBP	4.54	□□□□□ -1.68
HRI1	YLR301W	SPR28	Q04921	423 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	YLR224W	Q05947	369 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	RTT10	Q08924	1013 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	HMI1	Q12039	706 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	GNT1	Q12096	491 aa		4.54	□□□□□ -1.68
HRI1	YLR301W	RPL11A	P0C0W9	174 aa	Known RBP	4.53	□□□□□ -1.68
HRI1	YLR301W	EMC1	P25574	760 aa		4.53	□□□□□ -1.68
HRI1	YLR301W	UGA2	P38067	497 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms