RNA–Protein interactions for RNA: YKL190W

CNB1, Transcript of Calcineurin B, yeast

Gene CNB1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNB1	YKL190W	YJL007C	P47080	104 aa		4.95	□□□□□ -1.62
CNB1	YKL190W	FOL1	P53848	824 aa		4.95	□□□□□ -1.62
CNB1	YKL190W	CLF1	Q12309	687 aa	Predicted RBP	4.95	□□□□□ -1.62
CNB1	YKL190W	FLO1	P32768	1537 aa		4.95	□□□□□ -1.62
CNB1	YKL190W	CDC19	P00549	500 aa	Known RBP	4.94	□□□□□ -1.62
CNB1	YKL190W	CHO2	P05374	869 aa	Known RBP	4.94	□□□□□ -1.62
CNB1	YKL190W	PWP2	P25635	923 aa	Known RBP	4.94	□□□□□ -1.62
CNB1	YKL190W	SEC20	P28791	383 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	CHS3	P29465	1165 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	PAH1	P32567	862 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	ANP1	P32629	500 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	RER2	P35196	286 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	AAP1	P37898	856 aa	Known RBP	4.94	□□□□□ -1.62
CNB1	YKL190W	CRG1	P38892	291 aa	RIP-Chip data	4.94	□□□□□ -1.62	not detected
CNB1	YKL190W	TIF4631	P39935	952 aa	Known RBP	4.94	□□□□□ -1.62
CNB1	YKL190W	BIM1	P40013	344 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	LSB1	P53281	241 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	RPT6	Q01939	405 aa	Known RBP	4.94	□□□□□ -1.62
CNB1	YKL190W	VPS30	Q02948	557 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	YML037C	Q03703	340 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	EST2	Q06163	884 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	SKG3	Q06315	1026 aa		4.94	□□□□□ -1.62
CNB1	YKL190W	SAM2	P19358	384 aa	Known RBP	4.93	□□□□□ -1.62
CNB1	YKL190W	EUG1	P32474	517 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	BRN1	P38170	754 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	YHL050C	P38721	697 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	CIC1	P38779	376 aa	Known RBP	4.93	□□□□□ -1.62
CNB1	YKL190W	TOM71	P38825	639 aa	Known RBP	4.93	□□□□□ -1.62
CNB1	YKL190W	GPB2	P39717	880 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	TPM2	P40414	161 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	ATG32	P40458	529 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	HST3	P53687	447 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	YNL108C	P53929	270 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	ARP5	P53946	755 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	STE20	Q03497	939 aa	Known RBP	4.93	□□□□□ -1.62
CNB1	YKL190W	YML020W	Q03722	664 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	UBX5	Q06682	500 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	MET7	Q08645	548 aa		4.93	□□□□□ -1.62
CNB1	YKL190W	ENO2	P00925	437 aa	Known RBP	4.92	□□□□□ -1.62
CNB1	YKL190W	RAD18	P10862	487 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	MAK31	P23059	88 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	PEP3	P27801	918 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	SRP40	P32583	406 aa	Predicted RBP	4.92	□□□□□ -1.62
CNB1	YKL190W	DLD1	P32891	587 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	MYO3	P36006	1272 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	RIM21	P48565	533 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	GCR2	Q01722	534 aa		4.92	□□□□□ -1.62
CNB1	YKL190W	NUC1	P08466	329 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	RPL8A	P17076	256 aa	Known RBP	4.91	□□□□□ -1.62
CNB1	YKL190W	PRO3	P32263	286 aa	Known RBP	4.91	□□□□□ -1.62
CNB1	YKL190W	PAM1	P37304	830 aa	Known RBP	4.91	□□□□□ -1.62
CNB1	YKL190W	MAL31	P38156	614 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	MXR1	P40029	184 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	SPO22	P40511	975 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	VPS53	P47061	822 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	HUL5	P53119	910 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	ALD6	P54115	500 aa	Known RBP	4.91	□□□□□ -1.62
CNB1	YKL190W	ULP1	Q02724	621 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	UTP4	Q06679	776 aa	Known RBP	4.91	□□□□□ -1.62
CNB1	YKL190W	RKM4	Q12504	494 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	TUS1	Q06412	1307 aa		4.91	□□□□□ -1.62
CNB1	YKL190W	SES1	P07284	462 aa	Known RBP	4.9	□□□□□ -1.63
CNB1	YKL190W	TIF1	P10081	395 aa	Known RBP	4.9	□□□□□ -1.63
CNB1	YKL190W	SAM1	P10659	382 aa	Known RBP	4.9	□□□□□ -1.63
CNB1	YKL190W	ISF1	P32488	338 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	RGT1	P32862	1170 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	LDH1	P38139	375 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	YJR115W	P47152	169 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	YGR125W	P53273	1036 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	SLD5	Q03406	294 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	BUL2	Q03758	920 aa	Known RBP	4.9	□□□□□ -1.63
CNB1	YKL190W	TFC6	Q06339	672 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	MSC6	Q08818	692 aa	Known RBP	4.9	□□□□□ -1.63
CNB1	YKL190W	YOR131C	Q12486	218 aa		4.9	□□□□□ -1.63
CNB1	YKL190W	PGA3	Q12746	312 aa	Known RBP	4.9	□□□□□ -1.63
CNB1	YKL190W	TY1B-A	O13527	1196 aa	Known RBP	4.89	□□□□□ -1.63
CNB1	YKL190W	CIT1	P00890	479 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	RPC31	P17890	251 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
CNB1	YKL190W	UTR4	P32626	227 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	MAC1	P35192	417 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	PHO88	P38264	188 aa	Predicted RBP	4.89	□□□□□ -1.63
CNB1	YKL190W	HXT13	P39924	564 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	YJR107W	P47145	328 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	YKE2	P52553	114 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	VPS62	P53285	467 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	HXT17	P53631	564 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	MDM1	Q01846	1127 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	SVF1	Q05515	481 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	MRX10	Q05648	414 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	VIP1	Q06685	1146 aa	Known RBP	4.89	□□□□□ -1.63
CNB1	YKL190W	ICL2	Q12031	575 aa		4.89	□□□□□ -1.63
CNB1	YKL190W	RDS2	P19541	446 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	HCA4	P20448	770 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	MCM4	P30665	933 aa	Known RBP	4.88	□□□□□ -1.63
CNB1	YKL190W	FBP26	P32604	452 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	SEC8	P32855	1065 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	MKS1	P34072	584 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	SAS3	P34218	831 aa		4.88	□□□□□ -1.63
CNB1	YKL190W	CSM2	P40465	213 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms