RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W DBP5P20449 482 aaKnown RBP4.43□□□□□ -1.7
UBP12YJL197W DOM34P33309 386 aa4.43□□□□□ -1.7
UBP12YJL197W SSN3P39073 555 aa4.43□□□□□ -1.7
UBP12YJL197W ROD1Q02805 837 aa4.43□□□□□ -1.7
UBP12YJL197W TIF35Q04067 274 aaKnown RBP4.43□□□□□ -1.7
UBP12YJL197W GAL1P04385 528 aa4.43□□□□□ -1.7
UBP12YJL197W MRF1P30775 413 aaPredicted RBP4.43□□□□□ -1.7
UBP12YJL197W BLI1P35727 113 aa4.43□□□□□ -1.7
UBP12YJL197W TAF1P46677 1066 aa4.43□□□□□ -1.7
UBP12YJL197W SYP1P25623 870 aaKnown RBP4.42□□□□□ -1.7
UBP12YJL197W NIC96P34077 839 aa4.42□□□□□ -1.7
UBP12YJL197W YKL133CP36066 463 aa4.42□□□□□ -1.7
UBP12YJL197W HSE1P38753 452 aa4.42□□□□□ -1.7
UBP12YJL197W LEU1P07264 779 aaKnown RBP4.42□□□□□ -1.7
UBP12YJL197W MPH2P0CD99 609 aa4.42□□□□□ -1.7
UBP12YJL197W RAD53P22216 821 aa4.42□□□□□ -1.7
UBP12YJL197W CNN1P43618 361 aa4.42□□□□□ -1.7
UBP12YJL197W PUS5Q06244 254 aa4.42□□□□□ -1.7
UBP12YJL197W AEP2P22136 580 aa4.42□□□□□ -1.7
UBP12YJL197W VBA3P25594 458 aa4.42□□□□□ -1.7
UBP12YJL197W SIT1P39980 628 aa4.42□□□□□ -1.7
UBP12YJL197W HNT2P49775 206 aa4.42□□□□□ -1.7
UBP12YJL197W YTM1Q12024 460 aaPredicted RBP4.42□□□□□ -1.7
UBP12YJL197W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7 RIP-Chip
UBP12YJL197W NAB2P32505 525 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
UBP12YJL197W TFC4P33339 1025 aa4.41□□□□□ -1.7
UBP12YJL197W PET10P36139 283 aa4.41□□□□□ -1.7
UBP12YJL197W RGA1P39083 1007 aa4.41□□□□□ -1.7
UBP12YJL197W MBP1P39678 833 aa4.41□□□□□ -1.7
UBP12YJL197W RSC8P43609 557 aaKnown RBP4.41□□□□□ -1.7
UBP12YJL197W GUS1P46655 708 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
UBP12YJL197W SRD1P09007 221 aa4.41□□□□□ -1.7
UBP12YJL197W MOT2P34909 587 aaKnown RBP4.41□□□□□ -1.7
UBP12YJL197W SAP185P40856 1058 aa4.41□□□□□ -1.7
UBP12YJL197W ALG2P43636 503 aa4.41□□□□□ -1.7
UBP12YJL197W YGL176CP46945 554 aa4.41□□□□□ -1.7
UBP12YJL197W NIT2P47016 307 aa4.41□□□□□ -1.7
UBP12YJL197W YPL066WQ12194 479 aa4.41□□□□□ -1.7
UBP12YJL197W SHM1P37292 490 aaPredicted RBP4.41□□□□□ -1.7
UBP12YJL197W SPO71Q03868 1245 aa4.41□□□□□ -1.7
UBP12YJL197W RKM2Q03942 479 aa4.41□□□□□ -1.7
UBP12YJL197W IRE1P32361 1115 aa4.4□□□□□ -1.7
UBP12YJL197W EXO5P38289 585 aa4.4□□□□□ -1.7
UBP12YJL197W TAN1P53072 289 aaPredicted RBP4.4□□□□□ -1.7
UBP12YJL197W CUS1Q02554 436 aaPredicted RBP4.4□□□□□ -1.7
UBP12YJL197W EST2Q06163 884 aa4.4□□□□□ -1.7
UBP12YJL197W RSC2Q06488 889 aa4.4□□□□□ -1.7
UBP12YJL197W HIF1Q12373 385 aa4.4□□□□□ -1.7
UBP12YJL197W TOP3P13099 656 aa4.4□□□□□ -1.7
UBP12YJL197W YKL077WP36081 392 aa4.4□□□□□ -1.7
UBP12YJL197W MET13P53128 600 aa4.4□□□□□ -1.7
UBP12YJL197W SNP1Q00916 300 aaPredicted RBP4.4□□□□□ -1.7
UBP12YJL197W YML131WQ03102 365 aa4.4□□□□□ -1.7
UBP12YJL197W GFD2P25370 566 aaKnown RBP4.4□□□□□ -1.71
UBP12YJL197W AHP1P38013 176 aaKnown RBP4.4□□□□□ -1.71
UBP12YJL197W EXO84P38261 753 aa4.4□□□□□ -1.71
UBP12YJL197W YER156CP40093 338 aaKnown RBP4.4□□□□□ -1.71
UBP12YJL197W OPY2Q06810 360 aa4.4□□□□□ -1.71
UBP12YJL197W PCL2P25693 308 aa4.39□□□□□ -1.71
UBP12YJL197W CKB2P38930 258 aa4.39□□□□□ -1.71
UBP12YJL197W MPH1P40562 993 aa4.39□□□□□ -1.71
UBP12YJL197W GZF3P42944 551 aaKnown RBP4.39□□□□□ -1.71
UBP12YJL197W GYP1Q08484 637 aa4.39□□□□□ -1.71
UBP12YJL197W FUS1P11710 512 aa4.39□□□□□ -1.71
UBP12YJL197W KCC4P25389 1037 aa4.39□□□□□ -1.71
UBP12YJL197W EMP65P40085 556 aa4.39□□□□□ -1.71
UBP12YJL197W BUL2Q03758 920 aaKnown RBP4.39□□□□□ -1.71
UBP12YJL197W YDR344CQ05510 147 aa4.39□□□□□ -1.71
UBP12YJL197W INH1P01097 85 aa4.39□□□□□ -1.71
UBP12YJL197W MSD1P15179 658 aaKnown RBP4.39□□□□□ -1.71
UBP12YJL197W IMP2'P32351 346 aa4.39□□□□□ -1.71
UBP12YJL197W RRN3P36070 627 aa4.39□□□□□ -1.71
UBP12YJL197W PAN5P38787 379 aa4.39□□□□□ -1.71
UBP12YJL197W YAP1801P38856 637 aa4.39□□□□□ -1.71
UBP12YJL197W TSR2Q06672 205 aaKnown RBP4.39□□□□□ -1.71
UBP12YJL197W CDC9P04819 755 aa4.38□□□□□ -1.71
UBP12YJL197W ADD66P36040 267 aa4.38□□□□□ -1.71
UBP12YJL197W SAP30P38429 201 aa4.38□□□□□ -1.71
UBP12YJL197W YJR096WP47137 282 aa4.38□□□□□ -1.71
UBP12YJL197W GNT1Q12096 491 aa4.38□□□□□ -1.71
UBP12YJL197W GLO4Q12320 285 aa4.38□□□□□ -1.71
UBP12YJL197W RPP1AP05318 106 aaPredicted RBP4.38□□□□□ -1.71
UBP12YJL197W CDC31P06704 161 aaKnown RBP4.38□□□□□ -1.71
UBP12YJL197W SPC19Q03954 165 aa4.38□□□□□ -1.71
UBP12YJL197W AOS1Q06624 347 aa4.38□□□□□ -1.71
UBP12YJL197W SFL1P20134 766 aa4.38□□□□□ -1.71
UBP12YJL197W PDC6P26263 563 aaKnown RBP4.38□□□□□ -1.71
UBP12YJL197W PRP19P32523 503 aaKnown RBP4.38□□□□□ -1.71
UBP12YJL197W SPC29P33419 253 aa4.38□□□□□ -1.71
UBP12YJL197W ARL1P38116 183 aaKnown RBP4.38□□□□□ -1.71
UBP12YJL197W RGD1P38339 666 aa4.38□□□□□ -1.71
UBP12YJL197W YHL041WP38730 149 aa4.38□□□□□ -1.71
UBP12YJL197W OAF1P39720 1047 aaPredicted RBP4.38□□□□□ -1.71
UBP12YJL197W ACA1P39970 489 aa4.38□□□□□ -1.71
UBP12YJL197W PHM6Q05637 104 aa4.38□□□□□ -1.71
UBP12YJL197W REH1Q06709 432 aa4.38□□□□□ -1.71
UBP12YJL197W FOB1O13329 566 aa4.37□□□□□ -1.71
UBP12YJL197W RGP1P16664 663 aa4.37□□□□□ -1.71
UBP12YJL197W AAR2P32357 355 aaPredicted RBP4.37□□□□□ -1.71
UBP12YJL197W SAH1P39954 449 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 182.7 ms