RNA–Protein interactions for RNA: YIL093C

RSM25, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM25, Length 795 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM25	YIL093C	AIM21	P40563	679 aa		4.72	□□□□□ -1.65
RSM25	YIL093C	MTR4	P47047	1073 aa	Known RBP	4.72	□□□□□ -1.65
RSM25	YIL093C	NSG2	P53898	299 aa		4.72	□□□□□ -1.65
RSM25	YIL093C	RAT1	Q02792	1006 aa	Known RBP	4.72	□□□□□ -1.65
RSM25	YIL093C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
RSM25	YIL093C	YMR074C	Q04773	145 aa		4.72	□□□□□ -1.65
RSM25	YIL093C	YDR215C	Q12240	137 aa		4.72	□□□□□ -1.65
RSM25	YIL093C	DED1	P06634	604 aa	Known RBP	4.71	□□□□□ -1.66
RSM25	YIL093C	TAF13	P11747	167 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	PRI2	P20457	528 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	SRM1	P21827	482 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	RAD27	P26793	382 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	MKK2	P32491	506 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	TIM23	P32897	222 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	YKL069W	P36088	180 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	CHZ1	P40019	153 aa	Predicted RBP	4.71	□□□□□ -1.66
RSM25	YIL093C	PEX8	P53248	589 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	YNR063W	P53749	607 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	NAN1	Q02931	896 aa	Known RBP	4.71	□□□□□ -1.66
RSM25	YIL093C	SVL3	Q03088	825 aa	Known RBP	4.71	□□□□□ -1.66
RSM25	YIL093C	RGA2	Q06407	1009 aa		4.71	□□□□□ -1.66
RSM25	YIL093C	AI3	P03877	415 aa		4.7	□□□□□ -1.66
RSM25	YIL093C	TRX2	P22803	104 aa	Known RBP	4.7	□□□□□ -1.66
RSM25	YIL093C	GRX1	P25373	110 aa	Known RBP	4.7	□□□□□ -1.66
RSM25	YIL093C	SFA1	P32771	386 aa		4.7	□□□□□ -1.66
RSM25	YIL093C	RPS0B	P46654	252 aa	Known RBP	4.7	□□□□□ -1.66
RSM25	YIL093C	ELA1	P53861	379 aa	Predicted RBP	4.7	□□□□□ -1.66
RSM25	YIL093C	DOT1	Q04089	582 aa	Known RBP	4.7	□□□□□ -1.66
RSM25	YIL093C	ESC2	Q06340	456 aa		4.7	□□□□□ -1.66
RSM25	YIL093C	OPI10	Q08202	246 aa		4.7	□□□□□ -1.66
RSM25	YIL093C	NOP14	Q99207	810 aa	Known RBP	4.7	□□□□□ -1.66
RSM25	YIL093C	RAD4	P14736	754 aa		4.69	□□□□□ -1.66
RSM25	YIL093C	GPT2	P36148	743 aa		4.69	□□□□□ -1.66
RSM25	YIL093C	YAR028W	P39548	234 aa		4.69	□□□□□ -1.66
RSM25	YIL093C	SNF7	P39929	240 aa	Known RBP	4.69	□□□□□ -1.66
RSM25	YIL093C	YFR016C	P43597	1233 aa	Known RBP	4.69	□□□□□ -1.66
RSM25	YIL093C	TMA46	Q12000	345 aa	Known RBP	4.69	□□□□□ -1.66
RSM25	YIL093C	YOR223W	Q12015	292 aa		4.69	□□□□□ -1.66
RSM25	YIL093C	TRP2	P00899	507 aa	Known RBP	4.68	□□□□□ -1.66
RSM25	YIL093C	BAS1	P22035	811 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	LYP1	P32487	611 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	RPN12	P32496	274 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	IES1	P43579	692 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	ENT3	P47160	408 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	FOL1	P53848	824 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	EAR1	Q03212	550 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	YMR187C	Q03236	431 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	RKM2	Q03942	479 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	TIF35	Q04067	274 aa	Known RBP	4.68	□□□□□ -1.66
RSM25	YIL093C	SPO20	Q04359	397 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	AVO1	Q08236	1176 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	YOR378W	Q08902	515 aa		4.68	□□□□□ -1.66
RSM25	YIL093C	ATP4	P05626	244 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	NAM7	P30771	971 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	THI4	P32318	326 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	MOT2	P34909	587 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	YHR020W	P38708	688 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	SKN7	P38889	622 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	SPF1	P39986	1215 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	ICP55	P40051	511 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	TIM54	P47045	478 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	TYW3	P53177	273 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	YGR021W	P53212	290 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	YNR029C	P53729	429 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	ATG16	Q03818	150 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	ENT2	Q05785	613 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	YLR225C	Q05948	407 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	TDA5	Q06417	326 aa	Known RBP	4.67	□□□□□ -1.66
RSM25	YIL093C	YPL066W	Q12194	479 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	YLL054C	Q12244	843 aa		4.67	□□□□□ -1.66
RSM25	YIL093C	RET1	P22276	1149 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	SYP1	P25623	870 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	RSC6	P25632	483 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	CDC11	P32458	415 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	ABD1	P32783	436 aa	Predicted RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	NFU1	P32860	256 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	SEA4	P38164	1038 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	ALG3	P38179	458 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	QNS1	P38795	714 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	NMD3	P38861	518 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	MPH1	P40562	993 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	ARI1	P53111	347 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	RSA3	Q05942	220 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	MCA1	Q08601	432 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	PHM7	Q12252	991 aa		4.66	□□□□□ -1.66
RSM25	YIL093C	TMA7	Q3E764	64 aa	Known RBP	4.66	□□□□□ -1.66
RSM25	YIL093C	DBP5	P20449	482 aa	Known RBP	4.65	□□□□□ -1.67
RSM25	YIL093C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
RSM25	YIL093C	IES5	P40060	125 aa		4.65	□□□□□ -1.67
RSM25	YIL093C	AOS1	Q06624	347 aa		4.65	□□□□□ -1.67
RSM25	YIL093C	SLX4	Q12098	748 aa		4.65	□□□□□ -1.67
RSM25	YIL093C	FAL1	Q12099	399 aa	Known RBP	4.65	□□□□□ -1.67
RSM25	YIL093C	ERP4	Q12450	207 aa		4.65	□□□□□ -1.67
RSM25	YIL093C	INO1	P11986	533 aa		4.64	□□□□□ -1.67
RSM25	YIL093C	STE5	P32917	917 aa		4.64	□□□□□ -1.67
RSM25	YIL093C	PGM1	P33401	570 aa	Known RBP	4.64	□□□□□ -1.67
RSM25	YIL093C	GGA2	P38817	585 aa	Known RBP	4.64	□□□□□ -1.67
RSM25	YIL093C	CNN1	P43618	361 aa		4.64	□□□□□ -1.67
RSM25	YIL093C	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
RSM25	YIL093C	PTC5	Q12511	572 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms